| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003610 |
|---|
| Symbol | |
|---|
| ID | 8557343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2213530 |
|---|
| End bp | 2214621 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646406705 |
|---|
| Product | L-proline Glycine Betaine ABC transport system permease protein proW |
|---|
| Protein accession | YP_003286235 |
|---|
| Protein GI | 262394381 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCAG AGCAAACTAA CAATGATCCC TGGTCGAATA CCGCTCCTGC ACAAGATGAT
CCTTGGTCAC AAGGTGTAGG TGCTGACGCT GCCCCAAGTA ATGACTGGTT AAGCTCAGAA
ACTGTAGAGC AAGCGCCATT CGACATTATG AACCCATTCC AAGATGCGGT TCTACCACTT
GATAGCTGGG TAGAATCGGG ATTGAACTGG TTGGTGGAAC ATGGTCGTCC TGTTTTCCAA
GCAATTCGAG TTCCAATCGA CTTTATTCTT ACCTCGTTTG AAACTGCTTT GGTGTCTACA
CCTGCGCCTA TCATGGTGCT CATTTTATTT TTGCTGGCGT GGCAGTTTTC CAATGTAAAA
CTCGGTTTTT CAACACTTGT ATCCCTTGTT TTTATCGGCC TAATTGGTGC GTGGTCACAG
GCGATGACAA CGCTCGCACT GGTTTTAACC GCCGTCTTCT TCTGTTTGCT TATCGGGCTA
CCGATGGGGA TATGGTTGGC GAGAAGCCAA ACCGCAGCCA AATTTGTTAG ACCAATACTC
GATGCAATGC AAACGACCCC CGCGTTCGTT TATCTAGTGC CAATCGTTAT GCTATTCGGT
ATTGGTAACG TTCCTGGCGT TGTAGTAACC ATCATTTTCG CACTGCCTCC CGTTGTGCGC
CTGACTATTT TAGGGATTCA GCAAGTACCT GAAGAGCTGA TCGAAGCGGG CCACTCTTTC
GGGGCAAACA AAAAACAGAT GCTTTACCGC ATCCAATTGC CATTGGCGTT ACCAACGATT
ATGGCAGGGG TAAACCAAAC CTTGATGCTT TCGCTTTCTA TGGTAGTGAT CGCTTCAATG
ATTGCGGTTG GCGGCTTGGG CCAAATGGTA CTTCGTGGTA TCGGCCGACT TGATATGGGT
CTTGCTGCTG TCGGTGGCTT AGGCATCGTA ATTCTTGCCA TTTTATTAGA CCGTATTACC
CAAGTATTAG GGGTTAATGC GGGTAACACC AAGCTTCGCT GGTATCACAC AGGTCCTGTT
TCATACCTAT TAAAACTGAA AACAAAGACG AACCAAGACG ATCTAAAACT TAGGAGAAAC
ATCAATGAAT AA
|
|---|
| Protein sequence | MSSEQTNNDP WSNTAPAQDD PWSQGVGADA APSNDWLSSE TVEQAPFDIM NPFQDAVLPL
DSWVESGLNW LVEHGRPVFQ AIRVPIDFIL TSFETALVST PAPIMVLILF LLAWQFSNVK
LGFSTLVSLV FIGLIGAWSQ AMTTLALVLT AVFFCLLIGL PMGIWLARSQ TAAKFVRPIL
DAMQTTPAFV YLVPIVMLFG IGNVPGVVVT IIFALPPVVR LTILGIQQVP EELIEAGHSF
GANKKQMLYR IQLPLALPTI MAGVNQTLML SLSMVVIASM IAVGGLGQMV LRGIGRLDMG
LAAVGGLGIV ILAILLDRIT QVLGVNAGNT KLRWYHTGPV SYLLKLKTKT NQDDLKLRRN
INE
|
|---|
| |