| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003604 |
|---|
| Symbol | |
|---|
| ID | 8557337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2205271 |
|---|
| End bp | 2206536 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646406699 |
|---|
| Product | diaminobutyrate-pyruvate aminotransferase |
|---|
| Protein accession | YP_003286229 |
|---|
| Protein GI | 262394375 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases
[TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTT TCAAAAAGCA GGAATCCAAC GTACGCTCAT ATTCAAACAA TTTCCCAGTC
GTTTTTCGTA AAGCGAAAGG CTGCTGGCTG GAAACAGAAC AAGGTGAACG ATACTTAGAC
TTCCTTGCTG GAGCGGGATC TCTAAATTAC GGCCATAACA ACCCAGTACT TAAGCAAGCA
CTGCTTGAGT ACATTGAGAT GGACGGTATT ACTCACGGTT TGGATATGCA CTCAGAAGCG
AAAGCATCGT TTCTTGAAGC GTTGGATACT TACATCCTTA AACCAAGAAA CTTGGACTAC
AAAGTTCAGT TTACTGGCCC AACCGGTACT AACGCCGTTG AGGCAGCACT TAAGTTAGCG
AAAAAAGTAA AAGGTCGCGA CAGCGTTGTT GCATTTACTA ACGGTTTCCA CGGTTGTACA
GCTGGCGCAC TGGCTGCAAC GGGTAACCAG CATCACAGAC AAGGTAACGG TTCTAGCTTA
AGTAACGTCA CTCGTATTCC ATTTGAAGGT TACGCTGGCG TTGATGGTCT AGCATTGTTC
GAAACCATGC TAAACGACAA CTCTGCAGGT ATGGATAAAC CAGCCGCTGT ACTTCTTGAA
ACTGTGCAGG GCGAGGGTGG TTTAAATGCT GCTTCAAACG AGTGGTTACA ACGTTTGAGC
AAAATCTGTA AAGCCAATGA CATTCTTGTG ATTGTCGATG ACATTCAAGC TGGTTGTGGA
CGCACAGGTA CTTTCTTTAG CTTTGAGCCG TCAGGTATTC AACCAGATAT CGTGACGCTA
TCGAAATCGA TCGGTGGTTA CGGTTTGCCA ATGGCCGTCG TTCTACTTAA ACCAGAGCTA
GACCAGTGGA AGCCAGGTGA GCATAACGGC ACGTTCCGTG GCAACAACCA TGCATTTATT
ACCGCGGCGA AAGCATTAGA AATTTATTGG GCAAATGATG ACTTTGAAAC ACACATCAAG
CAGTGTTCAG ACAAAGTAAG TGCTGTTATT GATCGCTGCG TTCGTCGCTT CCCACAAATG
TTTGTGCAGA AAAAAGGTCG CGGCATGATG GTTGGTATTG AGTGTATCAA CGGTGATATG
GCATCTGAAA TCGCGAAAAA CTGTTTCGAA AACGGAATGG TAATTGAGAC AGCTGGCCCT
GACGACGAAG TCGTTAAGTT CTTCTGCCCA CTTACGATTA GCGAGTCAGA ATTAGACCAA
GGACTAAGCA TCTTTGAAAG TGCAGTGGAA ACCATCGCTG CGAAACATTT CAAACAAGCA
TCTTAA
|
|---|
| Protein sequence | MDIFKKQESN VRSYSNNFPV VFRKAKGCWL ETEQGERYLD FLAGAGSLNY GHNNPVLKQA
LLEYIEMDGI THGLDMHSEA KASFLEALDT YILKPRNLDY KVQFTGPTGT NAVEAALKLA
KKVKGRDSVV AFTNGFHGCT AGALAATGNQ HHRQGNGSSL SNVTRIPFEG YAGVDGLALF
ETMLNDNSAG MDKPAAVLLE TVQGEGGLNA ASNEWLQRLS KICKANDILV IVDDIQAGCG
RTGTFFSFEP SGIQPDIVTL SKSIGGYGLP MAVVLLKPEL DQWKPGEHNG TFRGNNHAFI
TAAKALEIYW ANDDFETHIK QCSDKVSAVI DRCVRRFPQM FVQKKGRGMM VGIECINGDM
ASEIAKNCFE NGMVIETAGP DDEVVKFFCP LTISESELDQ GLSIFESAVE TIAAKHFKQA
S
|
|---|
| |