| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003583 |
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| Symbol | |
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| ID | 8557316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2182759 |
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| End bp | 2184462 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406678 |
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| Product | predicted signal transduction protein |
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| Protein accession | YP_003286208 |
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| Protein GI | 262394354 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCACCA TATTTGACCA ACAAGCCTCA GATAGTGACC GAGAGTTCCT GAAAATCGTT
GAAGAACGAT TCATTCATAT CTTCGACGTA TTTAACGAAG GCCTCTTCTA CATGGATGAG
TTTGGTACCA TGGTATTTTA CAACAAAGGC TTCTATGAAC AGCTCGGTAT TAACGCTGGC
CGAATCAGTT TAGAGCAGTG GTTAGAACTT GTTCATCCTC TTGATCGAGA AAGGCTGTCC
ACAAGGGTCG ATGCGCACAT CACGACCAAC AATACGAGGG TTACAACCAC TTACCGAGTT
CGTAAACCCA ATGGACAATA CGTCTGGATA GAAGGCGTAG CCATGACCAA AGAAACAGAA
CATGGCCATT ACATGGTTGG CAGCCATCGC GATATTTCTG AGCGTAAGCT GATGGAAAGT
TACATCCATC AAGTTGCATT TCATGACAAC GCGTCAGGCA TGGCTAACCG CGCCCATCTC
TTGCTGGATA TCGAGGACAG TGTACGTACC ACCGATTCTT GCGCGTCTAT TTGTTATATT
CAGATCGAAG ACATCAAATC TTACTTGAAT CAATATGGCA GTGAACTGGT CGACGGGTTA
GTAGAGAAGT TGCTACAAAC TCTCAGTCAC TTGCCCTCTC CAAACAGCTC GGTGTATCGC
GTGCATGATG ATGACTTTGC GATTTTGATT CACGATGAGT GCTCAATAGA AGCGCTACAG
AGTTACGCTG AAAGTTTAAA ACAAACCTAC CATGAAGCGG TGATTGAAGA AGGCCAATAC
CTAGGTAGCA ACATTAGCAT TGGTTTGTAT CCTTGTATTG ACCCTAGTCA CTCCGCAGAG
GAGATTTTAC GTAAAGCGGC AAGAACTTGT CAGTACGCGA GCGAACAAAA TAGAGACCGC
GTCGCGGTCT ACAGTGAGAA GACGCAGCAT GCCGTTGATC GCTACTTCTT TATTGAGCAA
GGTCTTAAAA GTGCGCTAGA AAAACAGACA TTAAGTGTTA AGTTTCAGCC AATTATTGAC
GCCAAAAGCT CAAAAGTGGT GAGCTTCGAA TCGCTAGTTC GCTGGCGTAG CAAAGAGTTT
GGCGAAATTT ATCCCGACGA GTTTATCCCT GTAGCAGAGA ACAAAGGATT GATCGTCGAA
CTGGGATATC AAGTATTTGC CAAAGCGTGT GAATTCATCA AAAACTACCG TGAACGTTAC
CAAAACCAAG TTCGTGTTAA CGTGAACGTT TCTGTACTTC AGTTGATGAA CAGCGAATTC
CCTACGCGAA TTAAAGCCAT GGCGGATGAA GCTGGCGTTG ACCCCGAGTC TATTGTTTTG
GAACTGACAG AAACGTTTAT TTTGGATAAT AACCAGACGG CCATTGCTCC CCTAAGCACG
CTCAGGGAGT TAGGTTTTGC ACTCTCGCTC GATGACTTTG GCTCTGGTTA CAGTTCATTA
AATAGCTTCT TCGACTTGCC GATGACACAA ATCAAAATTG ATAAGTCGAT GGCATGGAAG
ACATTGACCA ATCGCTCTTC TCAAGAGTAT TTGAAGTTTC TTATCACTAT GTGTCAGGAA
AACAATATTG AAGTGGTGAT AGAAGGCATC GAAGACGCAA AAATGTGTGA CTTCTTTTCC
GAGATGGGCG TCGATTATTT GCAAGGTTAT TGGTTCTCTA AACCACTCTC TGTTGCCAGT
GCCAGTCGCT ATTCATTGAG CTAA
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| Protein sequence | MTTIFDQQAS DSDREFLKIV EERFIHIFDV FNEGLFYMDE FGTMVFYNKG FYEQLGINAG
RISLEQWLEL VHPLDRERLS TRVDAHITTN NTRVTTTYRV RKPNGQYVWI EGVAMTKETE
HGHYMVGSHR DISERKLMES YIHQVAFHDN ASGMANRAHL LLDIEDSVRT TDSCASICYI
QIEDIKSYLN QYGSELVDGL VEKLLQTLSH LPSPNSSVYR VHDDDFAILI HDECSIEALQ
SYAESLKQTY HEAVIEEGQY LGSNISIGLY PCIDPSHSAE EILRKAARTC QYASEQNRDR
VAVYSEKTQH AVDRYFFIEQ GLKSALEKQT LSVKFQPIID AKSSKVVSFE SLVRWRSKEF
GEIYPDEFIP VAENKGLIVE LGYQVFAKAC EFIKNYRERY QNQVRVNVNV SVLQLMNSEF
PTRIKAMADE AGVDPESIVL ELTETFILDN NQTAIAPLST LRELGFALSL DDFGSGYSSL
NSFFDLPMTQ IKIDKSMAWK TLTNRSSQEY LKFLITMCQE NNIEVVIEGI EDAKMCDFFS
EMGVDYLQGY WFSKPLSVAS ASRYSLS
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