Gene VEA_003553 details

Gene Information

• Locus tag: VEA_003553
• ID: 8557286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2143002
• End bp: 2144942
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646406648
• Product: hypothetical protein
• Protein accession: YP_003286178
• Protein GI: 262394324

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.434143
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCAGCAT TGATGAATAC GACTGAAACA TCTTCACTTC CTCTTATCGT TGCAGGTCCG 
ATTTTGCGCA AAGTGACCGC AACTGAAATC AATATTTGGC TAGTCACCAC CCAACGCTTG 
GAGGGTATGG TGCAAATTAC GGATGAAAAC GCCTCCGTCC TTCATCAAGC CCCTTTAAGT 
GAGCAAAAAG AACAGCTTCA AATCGGTCTC AATGCGTGGT GCTGTTTGTT GCAATTAAAG 
GGCGAGTTTC CGACCCATCA AACGTTACGC TATCAAATAC AAACGCAACA CGGCTCAGTA 
ACGGAACTGC TTCCTCATCT GACTTATGAA CGAGATAACT GTCCAAATTT GGGCGTTGAG 
TTCCTAATCA GCGAAAAAGC AGATTATGTT CTGCATGGCT CGTGCCGGAA TCCCCACCAC 
TTCAGTAAAG ATACATTGGT CGCTGCGGAT CATAAAATCG CATCTCAAAC CATCGAAGAA 
AGACCAGATA TGCTCATCAT GAGTGGTGAC CAAATCTACG CAGACCATGT TGCAGGCCCT 
ACTCTGGACG CCATCGAACA AGTCATTGCC CTGCTCGGTT TACCGGGCGA AGAATTCGAG 
CAAGCGCCGA TAAAAAATAC CAATGCCCTC TACCAGCACT CAGCTTGTTA TTATGGTCGG 
GACAAATTGT TGCCTCATTA TGTGAATGAT GGCAGTTTAC TGAGTACGTT TTTCCCACAC 
AGAGGGACGC CAATATTCAG CGCCAAAGAG TGTGAAAACC ATCTAATAAG CTTTGCCGAA 
TGCTTTGCAA TGTACTTATT GGTTTGGTCT CCAACCTTAT GGAAGCTCAT TCGGACAGAT 
CGCTTATTAG AAAATGAGTT TACTGTCGGC GGAGCAACTC TCGATCCCAA ATGGCAGCAG 
CAATGGCGCG AAGAAAAAGC TCAAATAGAT AAATTCGTCT CAGGTCTGGA TAAGGTTCAA 
CGCCTACTTG CTCACATTCC AACCTACATG ATCTTTGATG ATCACGATGT TACCGACGAT 
TGGAACCTTA CCATAGGCTG GGAACAAGCC GCGTACAGCA ACGCCTTTGC GAAACGTATT 
ATCGGGAACA GCCTGATTGC CTACTGGCTC TGCCAAGGGT GGGGAAACGC GCCAGAAAAA 
TTCAATGATG AGTTTATGAG TATCGCTCGA CACTTTTTCA ACGAGGGTTC CTCACAAACT 
CAAGATGCAT TTATTCAATA TTTGCATCGC TTTGAGAATT GGCATTACAC CATTCCGACG 
ACGCCAAAAG TTGTCGTGCT AGATACGCGA ACCAGACGCT GGCGTTCTGA GTCTAAAATG 
AACAAGCCCT CTGGGTTAAT GGACTGGGAA GCAATGATTG AGTTCCACCA AGAACTTGTT 
CATCAAGACA AAGTTATCAT TGTTTCTGCC GCGCCAATGT TCGGAGTGAA GTTTATCGAA 
GCACTGCAGC GAGTAGTGAC GATGCTTGGT AAACCATTGA TGGTCGATGC TGAAAACTGG 
ATGGCGCACC CCGGAAGTGC GAATACGCTT ATTAGTATTT TTACACATAC TAAGACGCCG 
ACCAATTTCG TTATTCTCTC TGGCGACGTG CACTACTCTT TTGCATACGA CATTAAACTT 
CGCTACCGAA AAAATAGTCC GAATATCTAT CAAATCACCT GTAGCGGGAT TAAAAATCAG 
TTCCCAACCC AATTGCTCAA TATTTGTGAT GGTCTAGATA GACTGCTATA TAGCCCTCGT 
TCGCCTTTAA ACTGGTTCAC AAAACGTAAG CGGCTAAAGA TCTACAAACG CGCACCAAGT 
TCGCACAATT TTTATCGCTT AGTTAACCAC AGCGCCATTG GTGAGCTGCG TCTTGATGAC 
GAAGGAAAGC CGAGCCAAAT TAGCATTCTA ACGAGCGATG GCGAAGAGGT ACATTTTCCA 
CCAACTCGTG CAGAAGGCTA A 

 

Protein sequence

MPALMNTTET SSLPLIVAGP ILRKVTATEI NIWLVTTQRL EGMVQITDEN ASVLHQAPLS 
EQKEQLQIGL NAWCCLLQLK GEFPTHQTLR YQIQTQHGSV TELLPHLTYE RDNCPNLGVE 
FLISEKADYV LHGSCRNPHH FSKDTLVAAD HKIASQTIEE RPDMLIMSGD QIYADHVAGP 
TLDAIEQVIA LLGLPGEEFE QAPIKNTNAL YQHSACYYGR DKLLPHYVND GSLLSTFFPH 
RGTPIFSAKE CENHLISFAE CFAMYLLVWS PTLWKLIRTD RLLENEFTVG GATLDPKWQQ 
QWREEKAQID KFVSGLDKVQ RLLAHIPTYM IFDDHDVTDD WNLTIGWEQA AYSNAFAKRI 
IGNSLIAYWL CQGWGNAPEK FNDEFMSIAR HFFNEGSSQT QDAFIQYLHR FENWHYTIPT 
TPKVVVLDTR TRRWRSESKM NKPSGLMDWE AMIEFHQELV HQDKVIIVSA APMFGVKFIE 
ALQRVVTMLG KPLMVDAENW MAHPGSANTL ISIFTHTKTP TNFVILSGDV HYSFAYDIKL 
RYRKNSPNIY QITCSGIKNQ FPTQLLNICD GLDRLLYSPR SPLNWFTKRK RLKIYKRAPS 
SHNFYRLVNH SAIGELRLDD EGKPSQISIL TSDGEEVHFP PTRAEG