| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003543 |
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| Symbol | |
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| ID | 8557276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2131283 |
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| End bp | 2131921 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406638 |
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| Product | lipopolysaccharide synthesis sugar transferase |
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| Protein accession | YP_003286168 |
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| Protein GI | 262394314 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT CACGCTACGA TTCAAATGTA TGCCACGCGA AAAGAACGTT TGATGTACTG
GTTGCAATGT TTATTTTGCT CGTCACTGCA CCACTATTCC CATTTATCGC GCTAGCTATA
AAAATCACAT CGAAAGGCCC AGTGATCTAT CGTCAACTGC GTGTTGGGCG CTGTACACCA
GAAAAAATGG ATCTTTTTCA AATCATGAAG TTTCGCACCA TGTATATTGA TGCGGAGCAA
CGCTCCGGTG CAGTTTGGGC AACCGAGAAT GATCCTCGAA TCACACCAAT AGGACGTTTT
TTACGTAAGA CGCGTTTAGA TGAGTTACCA CAGCTGTTTA ATGTGTTGAG AGGTGAAATG
TCGATGATCG GGCCACGTCC AGAGCGCCCT GCTTTCTACC AAAAGTTGGA AGATGAAATC
CCTTATTTTG TAGAACGCAC ATATGGCGTA TTACCAGGAA TTACAGGCCT AGCACAAGTT
AACCAAGGCT ATGATGCTTG CATTGAAGAT GTGCGACGTA AAGTTGGGTT TGATCACAGT
TACGCACTAA GCTTAGGTTC GTTCTACTCT TGGATTTCAA TGGACCTTTC AATCATGAGC
AAAACATTCG TTGTGATGAT TGACGGACGA GGTCAGTAA
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| Protein sequence | MKNSRYDSNV CHAKRTFDVL VAMFILLVTA PLFPFIALAI KITSKGPVIY RQLRVGRCTP
EKMDLFQIMK FRTMYIDAEQ RSGAVWATEN DPRITPIGRF LRKTRLDELP QLFNVLRGEM
SMIGPRPERP AFYQKLEDEI PYFVERTYGV LPGITGLAQV NQGYDACIED VRRKVGFDHS
YALSLGSFYS WISMDLSIMS KTFVVMIDGR GQ
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