Gene VEA_003534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003534 
Symbol 
ID8557267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2119705 
End bp2120775 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content45% 
IMG OID646406629 
Productglycosyltransferase 
Protein accessionYP_003286159 
Protein GI262394305 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA TCTCGAACAA TCTTGAGAAA CCTGCCGTTG GTGAAATTTG GATTTTTCTT 
GATAGCCGCC TGTTTGGCGG TATCGAAAGT CACGTCATAG AGCTTGCTCG TGGATTAATG
ACATTTGGGC ACAAAGCACG TGTTGTCTTA ACGACTGAGT ACTCGCCACC AGCACAGATT
GTAGAGAAAG CAGAAGAATC CACCATCCCT GTGAGTTACT TGAACCATTT GTCTGGTGAG
CCACATAAGG CATTAAAGAT CAAACACCTA ACAAGCGCGG TCGCCAATCA CCAACCATCG
GTCATTCACT CCCACGGTTA CAAAGCGTCA ATCTTAGCGC GCTGTGCCAA GCTACTCACG
CGCACATTTC CTCGCTTGAT TTCAACTTAT CATGCAGGAG AATCATCCTC GGGCAAACTG
TGGCTCTATG ATTGGCTTGA TAGAAGTTCA GGCTACCTCT CTAACCACTG CTTTTCCGTC
AGCCCAAGCA TTCAGCGTAA AGTCATTTTC CCTTCGGAAC TGCTGAATAA CTTTGTTTCG
ATTCCCGATC GTAATCTCAA CTATCAAGAA ATCGCTTTCG TCGGCCGATT GAGCAAAGAA
AAAGGTGCCG ACCAATTTAT CGAAGTAGCA AAGCTCTGCC CAACACTGCA TTTTAGTGTT
TACGGTGATG GACCAGAAAG AGAATTACTC GCCCAAATTG CCCCTTCAAA TGTGACATTT
TTCGGTCATC AAACTGAAAT GGAGACCGTT TGGAAAAACA TTGGCGTGCT GGTAATTTCT
TCTCGCTATG AAGGCCTGCC TATGGCGGCG CTTGAAGCAA TGGCTAGAGG AATAGTAGTG
ATGAGCCTAC GCGTGGGTCG CTTGCCCGAT ATTATCCAAA CTGGCGAAAA TGGCTTTATT
GTCAATGAGA TCCCATCTCT CGCTCAATGC CTTAAACATT GGATGTCTCT TGATGAAGCG
CAGCAATCTC ACATTCGTCA AAACGCTCGG CAGACCATTA TTGATAATTT CTCGGCGCAA
AGCGTTATTC CTGTATTGCT ACGAAAATAT CAAATTGAAA CGGAGCAATA A
 
Protein sequence
MKLISNNLEK PAVGEIWIFL DSRLFGGIES HVIELARGLM TFGHKARVVL TTEYSPPAQI 
VEKAEESTIP VSYLNHLSGE PHKALKIKHL TSAVANHQPS VIHSHGYKAS ILARCAKLLT
RTFPRLISTY HAGESSSGKL WLYDWLDRSS GYLSNHCFSV SPSIQRKVIF PSELLNNFVS
IPDRNLNYQE IAFVGRLSKE KGADQFIEVA KLCPTLHFSV YGDGPERELL AQIAPSNVTF
FGHQTEMETV WKNIGVLVIS SRYEGLPMAA LEAMARGIVV MSLRVGRLPD IIQTGENGFI
VNEIPSLAQC LKHWMSLDEA QQSHIRQNAR QTIIDNFSAQ SVIPVLLRKY QIETEQ