| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003526 |
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| Symbol | |
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| ID | 8557259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2112271 |
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| End bp | 2113116 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406621 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_003286151 |
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| Protein GI | 262394297 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAA AAATGACATT AATCGCGCTG GCTGTTATGA CAGCGTCTTC ACAGCTTCAA
GCTGATACTT CTCTCACGCC TCCAGTTTCT CTTGCGCAAA GCTATCAAGA TGGTATCGAT
GTATCTGAAT ACTGGTATAG CGAAAAACTC GACGGCATTC GCGCCTATTG GACAGGACAA
CATCTCGTGA CGAGAAATGG TAACCGAATC TACGCTCCAG ATTGGTTTAT AGATTCACTA
CCTGACTATC CGTTAGATGG TGAGCTATGG GCGGGACGAG GCAATTTTCA TCTCGTACAA
CAAACGGTTT TGGATAAAAC GCCTGTGGAG TCAGCTTGGC GAAACATTGA TTTTATGATC
TTTGATATGC CGTATTCTGC TGGTGATTAC CGGAAGCGTT ATTACAACAT CAAAGACTTA
GTGCTCGAAG TAGACCAAGC TCATATCAAA TATGTCGAAC ACCGAGCGAT CCAAAATGAA
GCTCACCTGT TTGCGCAATT GGATAAGATT TCAATATCCG ATGGTGAAGG GGTGATGCTA
CGTAAGGTAT CAAGCCGTTA TCAAGCTGGA CGTGGTAGTG ATTTACTTAA ACTGAAACGA
TACGCGGATG ATGAAGCGCT AGTTGTGGGC TATAAGCCAG GCACGGGGCG TTTATTGGGT
ATGATGGGGG CGATGTTAGT TCGCTTACCA GATGGTACAG AGTTTTACAT TGGTAGTGGG
TTTACCGATG AAGTGCGTCG TCAGCCTCCG AAAATAGGTT CAACCATCAC GTTCAGGTAC
AACGGTTTTA CTCATAACGG TAAGCCACGT TTTGCCCGAT TCTTGCGTGA GAGGCTGAAG
GAATAG
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| Protein sequence | MPLKMTLIAL AVMTASSQLQ ADTSLTPPVS LAQSYQDGID VSEYWYSEKL DGIRAYWTGQ
HLVTRNGNRI YAPDWFIDSL PDYPLDGELW AGRGNFHLVQ QTVLDKTPVE SAWRNIDFMI
FDMPYSAGDY RKRYYNIKDL VLEVDQAHIK YVEHRAIQNE AHLFAQLDKI SISDGEGVML
RKVSSRYQAG RGSDLLKLKR YADDEALVVG YKPGTGRLLG MMGAMLVRLP DGTEFYIGSG
FTDEVRRQPP KIGSTITFRY NGFTHNGKPR FARFLRERLK E
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