| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003503 |
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| Symbol | |
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| ID | 8557236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2090049 |
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| End bp | 2091500 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406598 |
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| Product | sigma-54 dependent response regulator |
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| Protein accession | YP_003286128 |
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| Protein GI | 262394274 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACTC AATCCCATAT TAGTACAAAC CAACAATATA ACGCCTTTTC CGTACTGGTC
GTTGATGATG AATTGGGCAT GCAAGCCATT TTGAAAAAGG CATTGGGGAA GCTTTTCTCA
CATGTCGATA CTGCTGGCAG CATCGAAGAA GCAGAGCAAC TGCGCAATTC TCGCCATTAT
GATTTGATTT TGCTGGATAT TAATCTGCCG GGGCGTTCTG GGATTGAGTG GGAAGAAGCG
TTTGAAGATG ATGAAAAACG CGCCGATGTG ATTTTCATGA CGGGTTATGC GGATCTAGAA
ATTGCCATTC GAGCGCTGCA GCTCGGAGCT TCCGACTTTA TCCTCAAGCC CTTCAACCTT
GAGCAGATGC TAAAAGCGGT CAGTCGCTGC ATGGACCGAC GTCTAAACGA GCGCATGCAG
TACGCCATGA AGCGCGATTA CCAACGTCAC AATACCTCCG AGATCATCGG TGGTTCAGAG
AAAACGCGTC AGCTTAAGCA GCTTATTAAC CAGTTTGCAC CGTCGCGTGC TTCTGTTTTG
GTCGAAGGTG AGTCGGGTAC GGGTAAAGAG CTGGTTGCGC GAGGTATTCA CCAAGCGAGT
GGGCGAACGG GCCCATTTGT GCCAATCAAC TGTGGCGCCA TTGCGCCAGA GCTACTTGAA
AGTGAGTTAT TTGGTCATAC ATCGGGGGCG TTTACCGGTG CGAAAAAATC TCGTGAAGGT
TTGTTCCGTG TTGCGAACGG TGGCACCTTA TTTCTTGACG AAATTGGGGA AATGCCACTT
GCAATGCAAG CGTCGCTGTT ACGAGTTTTG GAACAGCGAA CTATCCGTCC TGTTGGTTCA
GAAAAAGAAA TCAGCATTGA TGTCCGTATT GTTGCCGCCA CCAACCGAAG CCTGCAAGAA
GAGGTCAACC AAGGAAACTT CCGCAGTGAC CTGTATTACC GTTTGAATGT GCTCAAAATC
GAAGTGTGTC CGCTGCGAGA GCGTAAAACC GATTTGTTTG AGTTAGTGCC ATTTTTCAGC
AATATGCTGA CGCGGGAGCT TGGTATGCCT GCGCCAAAAT GGGCGCACGA GGACATGGAA
GCCATGAGTG AGTACGATTG GCCAGGCAAT ATTCGTGAAC TGAAAAACTT GATTGAGCGA
TGCATTTTGC TCGGTAAGCC GCCAGCGCAT TATTGGCGGG AGCTGAATGG TGGACACTCA
TTGCCTAATG TGTCGATTAC CGTTTCTCAT TCTGCTGAAC TACCGACGTT TAAAGAAGGT
AGAGAGTTCA CTGGTGAGGG GTATCCAAAC AACTGGACAC TTAAAGAAGT CGAAAAAGCA
CATATAAAAC AGGTCGTTAA CTTGCACGAA GGCAACAAAT CAGCCGCTGC TCGTGACTTA
GGCGTGGCGC GTAAGACCTT AGAACGTAAG TATAAAGAAT GGGATTCTGA GGATGAGGAA
TATGCCGACT AA
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| Protein sequence | MSTQSHISTN QQYNAFSVLV VDDELGMQAI LKKALGKLFS HVDTAGSIEE AEQLRNSRHY
DLILLDINLP GRSGIEWEEA FEDDEKRADV IFMTGYADLE IAIRALQLGA SDFILKPFNL
EQMLKAVSRC MDRRLNERMQ YAMKRDYQRH NTSEIIGGSE KTRQLKQLIN QFAPSRASVL
VEGESGTGKE LVARGIHQAS GRTGPFVPIN CGAIAPELLE SELFGHTSGA FTGAKKSREG
LFRVANGGTL FLDEIGEMPL AMQASLLRVL EQRTIRPVGS EKEISIDVRI VAATNRSLQE
EVNQGNFRSD LYYRLNVLKI EVCPLRERKT DLFELVPFFS NMLTRELGMP APKWAHEDME
AMSEYDWPGN IRELKNLIER CILLGKPPAH YWRELNGGHS LPNVSITVSH SAELPTFKEG
REFTGEGYPN NWTLKEVEKA HIKQVVNLHE GNKSAAARDL GVARKTLERK YKEWDSEDEE
YAD
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