| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003494 |
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| Symbol | |
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| ID | 8557227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2077859 |
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| End bp | 2080714 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646406589 |
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| Product | formate dehydrogenase-O major subunit |
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| Protein accession | YP_003286119 |
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| Protein GI | 262394265 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTG TCAAACGCTC CGACAGTGTG AGCAAAGAAA CGAACCAGCT TGGCGTATCT
CGTCGTGCAT TCATGAAAAA CACTTCGCTT GCCGCTGGTG GCGCAGTGGT TGGTGCTAGT
CTATTCGCAC CGGGAATGAT GAAAAAGGCG CAAGCAAAAT CCGTCGATCC AGAAGCGAAA
ACAGAAGTTA AACGTACTAT CTGTTCTCAC TGTTCAGTGG GTTGTGGTAT TTACGCAGAA
GTTCAAAATG GTGTTTGGAC GGGTCAAGAG CCTGCATTCG ACCACCCATT TAACGCCGGT
GGTCACTGTG CAAAAGGCGC AGCACTGCGT GAACATGGTC ATGGTGAGCG CCGCCTTAAA
TACCCAATGA AGCTTGAAAA CGGTAAGTGG AAAAAGCTTT CTTGGGATCA AGCGATCGAA
GAAATCGGTA ACAAGGTGAT GGACATCCGC AAAGAGTCTG GCCCTGATTC GGTTTACTTC
TTGGGAAGCG CAAAGCACAG CAACGAACAA GCGTACTTGT TCCGCAAAAT GGCATCACTT
TGGGGCACTA ACAACGTTGA CCACCAAGCG CGTATTTGTC ACTCAACAAC CGTGGCGGGT
GTAGCGAACA CTTGGGGTTA CGGTGCGATG ACCAACTCTT TCAATGACAT GCACAACTGT
AAGTCGATGC TGTTTATTGG TTCAAACCCA GCTGAAGCAC ACCCAGTAGC GATGCAGCAC
ATTCTGATCG CGAAAGAGAA GAACAACTGT AAAATCGTCG TAGCGGATCC TCGTCGTACA
CGTACGGCAG CAAAATCGGA TCACTATGTC TCACTTCGTC CTGGTTCTGA CGTAGCATTC
ATTTGGGGTG TGTTGTGGCA CATCTTCGAA AACCAATGGG AAGATAAAGA GTTCATCCGT
CAACGTGTAT TCGGTATGGA TGAAATCCGT GCTGAAGTAG CGAAGTGGAC GCCAGCAGAA
GTTGAGCGCG TAACAGGCGT AAGCGAAGAA GACGTTTACC AAACAGCAAA ACTGCTTTCT
GAAAATCGCC CGGGCTGTAT TGTTTGGTGT ATGGGTGGTA CTCAGCATAC TACTGGTAAC
AACAACACAC GTGCTTACTG TGTGCTTGAG CTAGCGCTTG GTAACATTGG TAAATCAGGC
GGCGGCGCAA ACATCTTCCG TGGTCACGAT AACGTACAAG GCGCAACCGA CCTTGGCGTA
CTTTCTGACA CGCTACCGGG CTACTACGGC CTTTCTGAAG GTGCTTGGCG TCATTGGTCA
AAAGTGTGGG AAATCGATTA CGAATGGATT AAAGGTCGTT TCGATGACAA CGCTTATAGC
GGTCAGAAAC CAATGCACAG TGCAGGTATC CCAGTCTCTC GTTGGGTCGA TGGTGTACTG
GAAAACAAAG ACAACATTCG TCAACGCGAA AACATCCGCG CAATGTTCTA CTGGGGACAC
GCAGTGAACT CTCAAACACG TGGTGTTGAG ATGAAAAAAG CGATGCAGAA GCTGGACATG
ATGGTGATCG TGGACCCATA CCCAACTGTT GCTGCGGTAA TGAACGACCG TACCGACGGC
GTTTACCTGC TTCCTGCAAC AACGCAGTTT GAAACATACG GCAGTGTTAC CGCTTCTAAC
CGCTCTCTAC AATGGCGTGA TCAGGTGATT GAACCTTTGT TCGAATCAAA ACCAGACCAC
GAAATCATGT ACCTGCTTTC GAAGAAACTG GGTTATTCAG ATCTTCTGTT CAAAAACATC
CGTGTTGAAA ACAACCAGCC GGTGATTGAA GACCTAACGC GTGAATTCAA CAAAGGTATG
TGGACGATTG GTTACACAGG CCAAAGCCCA GAGCGTTTGA AAGCGCACCA ACAAAACTGG
CATACGTTCC ACAAAACCAC GTTGGAAGCG GAAGGTGGCC CTGTCAACGG TGAAACCTAC
GGTCTACCTT GGCCATGTTG GGGTACACCG GAAATGAAAC ACCCAGGTAC ACACATTCTG
TACGATACGT CTAAGACGGT TGCAGAAGGT GGCGGTAACT TCCGTACGCG CTTTGGTGTG
GAATTCGAAG GCAAGAGCCT TCTTGCAGAA GACAGCTACT CGAAAGGCTG TGAAATCAAA
GATGGTTACC CAGAGTTCAC TGACAAGTTA TTGAAACAAC TTGGTTGGTG GGACGATCTA
ACTGCTGAAG AGAAAGCGGC AGCAGAGGGT AAAAACTGGA AGACTGACCT TTCTGGCGGT
ATTCAGCGTG TCGCGATCAA GCACGGTTGT ATTCCATTTG GTAACGCGAA GGCGCGTGCG
ATTGTTTGGA CGTTCCCAGA CCGCGTACCG CTGCATCGTG AACCACTATA CACACCACGT
CGTGACCTTG TAACGGACTA CCCAACTTGG GAAGACAAAG ATGCGATCTT CCGTGTTCCT
ACGTTGTATA AATCCATTCA AGAGCAAGAC AAATCTGGCG AGTACCCAAT CGTTCTGACT
TCTGGTCGTC TGGTTGAATA CGAAGGTGGC GGTGAAGAGA CGCGTTCAAA CCCTTGGCTT
GCCGAGCTTC AACAAGAAAT GTTTGTTGAA GTGAACCCGA AAGACGCGAA CGATCTTGGC
TTTAGAGATG GTGATGATGT TTGGGTTGAA GGTGCAGAGA AGGGAAGAAT CAAGGTGAAA
GCGATGGTAA CACGCCGTGT GAAACCTGGC TTGGCGTTCA TTCCGTTCCA CTTTGGCGGT
AAGTTCGAAG GTGAAGACCT ACGTCCTAAA TACCCAGAAG GTACACAGCC TTACGTTGTT
GGCGAATCGG CCAACACGGC AACCACTTAC GGTTACGACC CGGTTACCTT GATGCAGGAA
ACCAAAGTAA CCCTATGTAA CATTCGTAAA GCGTAA
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| Protein sequence | MKLVKRSDSV SKETNQLGVS RRAFMKNTSL AAGGAVVGAS LFAPGMMKKA QAKSVDPEAK
TEVKRTICSH CSVGCGIYAE VQNGVWTGQE PAFDHPFNAG GHCAKGAALR EHGHGERRLK
YPMKLENGKW KKLSWDQAIE EIGNKVMDIR KESGPDSVYF LGSAKHSNEQ AYLFRKMASL
WGTNNVDHQA RICHSTTVAG VANTWGYGAM TNSFNDMHNC KSMLFIGSNP AEAHPVAMQH
ILIAKEKNNC KIVVADPRRT RTAAKSDHYV SLRPGSDVAF IWGVLWHIFE NQWEDKEFIR
QRVFGMDEIR AEVAKWTPAE VERVTGVSEE DVYQTAKLLS ENRPGCIVWC MGGTQHTTGN
NNTRAYCVLE LALGNIGKSG GGANIFRGHD NVQGATDLGV LSDTLPGYYG LSEGAWRHWS
KVWEIDYEWI KGRFDDNAYS GQKPMHSAGI PVSRWVDGVL ENKDNIRQRE NIRAMFYWGH
AVNSQTRGVE MKKAMQKLDM MVIVDPYPTV AAVMNDRTDG VYLLPATTQF ETYGSVTASN
RSLQWRDQVI EPLFESKPDH EIMYLLSKKL GYSDLLFKNI RVENNQPVIE DLTREFNKGM
WTIGYTGQSP ERLKAHQQNW HTFHKTTLEA EGGPVNGETY GLPWPCWGTP EMKHPGTHIL
YDTSKTVAEG GGNFRTRFGV EFEGKSLLAE DSYSKGCEIK DGYPEFTDKL LKQLGWWDDL
TAEEKAAAEG KNWKTDLSGG IQRVAIKHGC IPFGNAKARA IVWTFPDRVP LHREPLYTPR
RDLVTDYPTW EDKDAIFRVP TLYKSIQEQD KSGEYPIVLT SGRLVEYEGG GEETRSNPWL
AELQQEMFVE VNPKDANDLG FRDGDDVWVE GAEKGRIKVK AMVTRRVKPG LAFIPFHFGG
KFEGEDLRPK YPEGTQPYVV GESANTATTY GYDPVTLMQE TKVTLCNIRK A
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