Gene VEA_003488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003488 
Symbol 
ID8557221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2069002 
End bp2070222 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content47% 
IMG OID646406583 
Productammonium transporter 
Protein accessionYP_003286113 
Protein GI262394259 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTAA CTGCCAATCA GGTACACGGC GCTGTACAAA CTCTCACGCA AAGTTCCGAC 
ACACTTTTCT TACTACTTGG CGCAATCATG GTTTTTTTGA TGCATGCTGG TTTTGCTTTT
CTTGAAGTAG GAACCGTGCG CCAAAAGAAC CAAGTTAATG CTTTAGTTAA AATCTTGGCC
GATTTCGGTA TTTCCGCCAT TGCGTATTTT TTCATTGGAT ACTGGGTCGC TTATGGCGGC
ACCTTCTTTG CTGATGCAGA GACGTTATCT CAAGGCAATG GTTACGAGTT GGTGAAGTTC
TTTTTCTTGC TGACCTTCGC TGCAGCGATT CCTGCTATTG TTTCTGGTGG TATCGCAGAG
CGAGCTCGTT TTTATCCGAT TCTAATCGCA ACATTTTTCA CTGTCGGCAT CGTATACCCG
TTATTTGAGG GAATGATCTG GAACGGAAAC TTTGGTGTTC AAGCTTGGTT TGAAAATACC
TTTGGTTATG GCTTTCACGA CTTTGCAGGT TCAGTCGTTG TACATGGTGT TGGCGGCTGG
ATAGCGTTGG TTGCCGTTGT GTTTTTGGGC ATGAGAAAAG GCAGAGTTCG AGCAGGAAAG
CATACCAACT TTGCACCTTC GAATATTCCG TTTTTGGCTT TGGGAGCTTG GATCTTATGT
GTGGGGTGGT TTGGCTTCAA CGTCATGTCA GCTCAAACCG TGTCAGGCAT AAGTGGCTTG
GTGGCTATGA ACTCATTGAT GGCAATGGTC GGAGGCATTG TCGCGTCATT GTTGGCTGGT
AAGAATGACC CCGGCTTTAT TCATAACGGC CCACTAGCTG GCTTGGTTGC TGTATGTGCG
GGCTCAGACT TAATGCATCC TATCGGTGCT TTAGTGACAG GTGCGATTGC TGGCGTGCTA
TTTGTTTATC TTTTTACCTA CCTACAAAAC AAAACCAAGA TTGATGATGT GTTGGGTGTC
TGGCCTTTAC ACGGTTTATG TGGAGCTTGG GGTGGTATTG CTGCGGGGAT CTTTGGTCAA
AGCGCGTTGG GTGGGCTAGG TGGCGTGAGC ATTATCGTTC AGCTTCTAGG AACGCTTTTG
GGCATTTCTA TCGCAGTGAT TGGGGCGCTT GCAGTCTACG GCGCGATCAA TGCCAGTATG
GGACTAAGGC TTTCGGAAGA AGACGAATTC AATGGCGCTG ACCTAGCCAT TCATAAAATA
TCTTCTACCA ACGAGGATTG A
 
Protein sequence
MSVTANQVHG AVQTLTQSSD TLFLLLGAIM VFLMHAGFAF LEVGTVRQKN QVNALVKILA 
DFGISAIAYF FIGYWVAYGG TFFADAETLS QGNGYELVKF FFLLTFAAAI PAIVSGGIAE
RARFYPILIA TFFTVGIVYP LFEGMIWNGN FGVQAWFENT FGYGFHDFAG SVVVHGVGGW
IALVAVVFLG MRKGRVRAGK HTNFAPSNIP FLALGAWILC VGWFGFNVMS AQTVSGISGL
VAMNSLMAMV GGIVASLLAG KNDPGFIHNG PLAGLVAVCA GSDLMHPIGA LVTGAIAGVL
FVYLFTYLQN KTKIDDVLGV WPLHGLCGAW GGIAAGIFGQ SALGGLGGVS IIVQLLGTLL
GISIAVIGAL AVYGAINASM GLRLSEEDEF NGADLAIHKI SSTNED