Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003488 |
Symbol | |
ID | 8557221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2069002 |
End bp | 2070222 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646406583 |
Product | ammonium transporter |
Protein accession | YP_003286113 |
Protein GI | 262394259 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGTAA CTGCCAATCA GGTACACGGC GCTGTACAAA CTCTCACGCA AAGTTCCGAC ACACTTTTCT TACTACTTGG CGCAATCATG GTTTTTTTGA TGCATGCTGG TTTTGCTTTT CTTGAAGTAG GAACCGTGCG CCAAAAGAAC CAAGTTAATG CTTTAGTTAA AATCTTGGCC GATTTCGGTA TTTCCGCCAT TGCGTATTTT TTCATTGGAT ACTGGGTCGC TTATGGCGGC ACCTTCTTTG CTGATGCAGA GACGTTATCT CAAGGCAATG GTTACGAGTT GGTGAAGTTC TTTTTCTTGC TGACCTTCGC TGCAGCGATT CCTGCTATTG TTTCTGGTGG TATCGCAGAG CGAGCTCGTT TTTATCCGAT TCTAATCGCA ACATTTTTCA CTGTCGGCAT CGTATACCCG TTATTTGAGG GAATGATCTG GAACGGAAAC TTTGGTGTTC AAGCTTGGTT TGAAAATACC TTTGGTTATG GCTTTCACGA CTTTGCAGGT TCAGTCGTTG TACATGGTGT TGGCGGCTGG ATAGCGTTGG TTGCCGTTGT GTTTTTGGGC ATGAGAAAAG GCAGAGTTCG AGCAGGAAAG CATACCAACT TTGCACCTTC GAATATTCCG TTTTTGGCTT TGGGAGCTTG GATCTTATGT GTGGGGTGGT TTGGCTTCAA CGTCATGTCA GCTCAAACCG TGTCAGGCAT AAGTGGCTTG GTGGCTATGA ACTCATTGAT GGCAATGGTC GGAGGCATTG TCGCGTCATT GTTGGCTGGT AAGAATGACC CCGGCTTTAT TCATAACGGC CCACTAGCTG GCTTGGTTGC TGTATGTGCG GGCTCAGACT TAATGCATCC TATCGGTGCT TTAGTGACAG GTGCGATTGC TGGCGTGCTA TTTGTTTATC TTTTTACCTA CCTACAAAAC AAAACCAAGA TTGATGATGT GTTGGGTGTC TGGCCTTTAC ACGGTTTATG TGGAGCTTGG GGTGGTATTG CTGCGGGGAT CTTTGGTCAA AGCGCGTTGG GTGGGCTAGG TGGCGTGAGC ATTATCGTTC AGCTTCTAGG AACGCTTTTG GGCATTTCTA TCGCAGTGAT TGGGGCGCTT GCAGTCTACG GCGCGATCAA TGCCAGTATG GGACTAAGGC TTTCGGAAGA AGACGAATTC AATGGCGCTG ACCTAGCCAT TCATAAAATA TCTTCTACCA ACGAGGATTG A
|
Protein sequence | MSVTANQVHG AVQTLTQSSD TLFLLLGAIM VFLMHAGFAF LEVGTVRQKN QVNALVKILA DFGISAIAYF FIGYWVAYGG TFFADAETLS QGNGYELVKF FFLLTFAAAI PAIVSGGIAE RARFYPILIA TFFTVGIVYP LFEGMIWNGN FGVQAWFENT FGYGFHDFAG SVVVHGVGGW IALVAVVFLG MRKGRVRAGK HTNFAPSNIP FLALGAWILC VGWFGFNVMS AQTVSGISGL VAMNSLMAMV GGIVASLLAG KNDPGFIHNG PLAGLVAVCA GSDLMHPIGA LVTGAIAGVL FVYLFTYLQN KTKIDDVLGV WPLHGLCGAW GGIAAGIFGQ SALGGLGGVS IIVQLLGTLL GISIAVIGAL AVYGAINASM GLRLSEEDEF NGADLAIHKI SSTNED
|
| |