Gene VEA_003474 details

Gene Information

• Locus tag: VEA_003474
• ID: 8557207
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2056127
• End bp: 2056804
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646406569
• Product: membrane protein
• Protein accession: YP_003286099
• Protein GI: 262394245
• COG category: [S] Function unknown
• COG ID: [COG2836] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.551919
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCCTG ACTTTATTGG TGCTTTGATG ATCGGCCTCG TCGGGGCGGG TCATTGCATG 
GGAATGTGTG GTGGTATCGC GTCTCTGCTT ACCATGGGCT CTTCTACAAG TAAAAGCTCC 
CCCCTTATTC CACTCTTCTA CAACCTAGGG CGATTGAGCA GCTATGCCGT AATCGGTGCA 
TTAGTAGGCG GAGCAATATC AGGTTTATCT GAGCTAAGTG GATTAACGCA TTCTCTTGCT 
TGGTTAAGGC TGATTGCCGC ACTGTTCATG ATTCTGGTTG CGCTTTATAT TGCTAGATGG 
TGGCAAGGTT TACTGTTAAT AGAAAAGTTA GGACAGCACA TTTGGCGCTT TATCTCACCT 
GCTGGTAAGC GTTTGTTGCC ACTAAAGCAC CCTCTTCATG CTTTACCATT TGGCTTCATT 
TGGGGCTGGT TACCATGCGG CTTGGTTTAT TCTGCGCTAA CTTGGTCGGC GGTTTCAGGC 
AGCGCAATAA ACGGTGGTCT TATTATGCTC GCGTTTGGCC TCGGAACACT TCCGGCAATG 
CTGATTATTG GATATGGTGC CAACCATTTT CAGAAATTAC AAAAATCGTT AATATTTAGA 
AATATTTCAG CATTAATCCT TATTGGGTAT GGTTCGTACA CTGCTGTAGG AGCCATGGAG 
TTACTCGGTT TCATATAA 

 

Protein sequence

MTPDFIGALM IGLVGAGHCM GMCGGIASLL TMGSSTSKSS PLIPLFYNLG RLSSYAVIGA 
LVGGAISGLS ELSGLTHSLA WLRLIAALFM ILVALYIARW WQGLLLIEKL GQHIWRFISP 
AGKRLLPLKH PLHALPFGFI WGWLPCGLVY SALTWSAVSG SAINGGLIML AFGLGTLPAM 
LIIGYGANHF QKLQKSLIFR NISALILIGY GSYTAVGAME LLGFI