| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003435 |
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| Symbol | |
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| ID | 8557168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2016900 |
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| End bp | 2021741 |
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| Gene Length | 4842 bp |
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| Protein Length | 1613 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406530 |
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| Product | NAD-specific glutamate dehydrogenase large form |
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| Protein accession | YP_003286060 |
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| Protein GI | 262394206 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGC GTGAAAATGT AGTGCCGGTT CTGCTTGAAA AAGTTTACCA ACTGATTCAA
GACAAACTCG AGCTTTCTCA CCAAACGCTT GTAACTAAAC TTGCTCAACA CTTATTCAGT
AACATTGCTG ATGATGACCT GATTCAGCGA AACGAATCCG ATCTTTATGG TGCTGTCGTC
AGCCTTTGGC ACCATATCAA TGAAAAAAAA CCAGAAGAGA TTTCGGTACG AGTATTTAAC
CCGACCGTAA GTCGTCAAGG CTGGCAATCC ACACACACAA TCGTAGAAAT TGTTGTTCCA
GATAGTCCAT TCTTAGTGGA CTCAGTCAAA ATGGCTTTAG CGCGTTTGGA TCTTGTTTGC
CACTTAATGT TAAACAACCC AACACAGATA CAGCGTGATA AAAAAGGCCA AGTTACCGAC
GTAAACGGTG AGGGTGGTGT TCTTCAATCA CTGTTCCATA TCGAGGTAGA CCGCCTTACT
AGTAAAGAAG AGATGCAAGC GCTTAAAGAA GAGCTGTTAA AAATTCTATC TGACACTCGT
TTAGTCGTTG ATGACTGGAA GCAAATGGTT GATAAGCTTA AGCTTGTGAC TGATGAACTT
GAGAAAAATA AAGATCGTGT TTCTATCCAA ACGGATCGTA TGGACGAAAC GATCGCATTT
CTTCGTTGGC TAGAAGATCA TAACTTTACC TTTATGGGTT ACAAAGATTA TGACTTAGAA
GAAGTCAATG GTGATACCGA GCTTGTTCCT GCTAAAGAAA AAGGACTTGG TCTATTTGCT
GATGACAAGC GTGTGCGTAG CGTCAAGCTA TCTGAGCTTT CAGATTCAGC GCGGTTAGAA
GCGAAAAAGC CATACGCTCT GATCATCACA AAAGGTAACA AAGCATCTCG TATTCACCGT
CCAGCTTATA CTGATTACAT CGGTATTAAG AAGTTTGATG AAAACGGTAA AGTAATAGGT
GAGCATCGCT TTACTGGTCT ATATACCTCT GCCGTGTATA ACCAAGCGGT ACAAAGCATC
CCTCTGATCC GTGAAAAAGT GGACCGTATC CTTGAAGCGA GCGGATATCG TCACGGATCG
TATTCATACA AAGCATTGCA CAATATCTTA GAAAACTACC CACGCGATGA ACTACTTCAA
GCAAATGAAG AAGAGCTGCT TGAGGTGGGT ATGGGTGTTG TACAAATGCA AGATCGTGAC
CTACTGCGTT TATTTGTTCG TAAGGACCCA TTTGGTCGTT TCTTTAGCTG CATGGTTTAT
GTCACTAAAG ATCGTTACAA CACAGAGTTA CGTCGTCAAA CTCAACGCAT TCTTAAGCAG
TACTTTGGTT GCGAGCAAGA GGTTGAATTT ACAACGTTCT TCTCAGAAAG CCCACTAGCG
AGAACACATT ACATTGTTCG TGTAGACAAT AACAACATTG ACGTAGACGT GAAAAAGATC
GAGCAAAACC TAATGGAAGT TTCTACCTCT TGGGATGACA GACTAAAAGA ATCCATCATT
GCTAACTTTG GTGAAAGCAA AGGCCTTCCT CTTTCAAAAG AATACATGAG TGCGTTCCCT
CGCTCATATA AAGAGGACAT GATGCCAGGT TCTGCGGTTG CAGATATTGA ACGCTTAGAA
GCGTTAAGTG ATGATAATAA ACTTGGCATG TTGTTCTACC GACCTCAAGA AGAGGGGGCG
GATTCAAAAG CTGTTCGCTT GAAGTTATAC CACCGCGATG AGCCAATCCA TCTTTCTGAC
GTAATGCCAA TGCTTGAAAA CCTTGGCTTA CGAGTGATCG GTGAATCACC GTATGAGATC
GAGAAAAATA ACGGACAGAC ATTCTGGATC CTTGATTTCT CTATGCTGCA TAAGAGCGAG
AAAACGGTTG ATCTTCGTGA GGCTCGTGAT CGTTTCCAAC AAGCATTTGC CGCAATTTGG
GCGGGCAACC TTGAAAGTGA TGGTTTTAAC CGATTGGTAC TAGGTGCGTC GCTATCTGGG
CGTGAGATTT CCATTCTTCG TGCTTATGCT CGATACATGC GCCAAGTCGG TTTCCCATTC
AGTCAACAAT ACATCGAAGA CACGCTAAGC CACTACCCAG ACTTAGCAAC AGGTCTAGTC
AAGCTGTTCA CCAAGCGATT CGATCCGAAA CACAAAGGCA GTGAAAAAGG CCAAAACGAT
CTGATTAAAA AGCTAACAGA GCAGTTGGAT CGTGTAGAGA GCTTGGATGA TGATCGTATT
ATTCGTCGTT ACATCGACAT GATCATGGCG ACACTTCGTA CTAACTACTA TCAATTAGAC
GAAAGCAAGC AACCTAAGCC TTGGTTATCT TTGAAAATGA AACCGAGCGA TATTCCAGAG
ATTCCGCAGC CTGTACCCGC GTTCGAGATC TTTGTGTACG CACCAGATAT TGAGGGTGTT
CACCTTCGTG GCGGAAAAGT GGCTCGTGGT GGTTTACGTT GGTCAGATCG TCAAGAAGAT
TTCCGTACAG AGATTCTTGG TCTCGTAAAA GCTCAGCAAG TTAAGAACAC CGTTATCGTA
CCTGTGGGTG CAAAAGGCGG CTTTGTTTGT AAACGCCAGC CATCTCTCAC AACCCGTGAT
GAGATCTTTG CTGAAGGCCA ACGTTGTTAC AAACGATTTA TTCGTGCGCT ACTTGATGTA
TCAGATAACA TCATTGAAGG TGAAGTCGTG CCACCACAAA ACGTTGTGCG CCATGACGAA
GATGACCCAT ACCTAGTAGT GGCTGCAGAT AAAGGCACAG CAACATTCTC AGATCTAGCG
AACTCTGTTT CTGCAGAGTA CAACTTCTGG TTAGGTGACG CATTTGCTTC AGGTGGTTCA
AATGGTTACG ACCACAAAGC GATGGGTATC ACTGCAAAAG GTGGTTGGGA ATCTGTTAAG
CGTCACTTCC GTGAAATGGG CATCAACTGC CAGACCACTG ACTTTACCGC AATCGGTGTA
GGTGATATGG CAGGTGACGT GTTCGGTAAC GGTATGCTGT TATCGAAGCA CATTCTATTG
CAAGCTGCCT TTAACCACAT GCACATCTTT ATTGATCCAA ATCCAGATTC AGCCACCAGC
TGGGAAGAGC GTAACCGCTT GTTTAATCTG CCAAGATCAA GCTGGGAAGA TTACAATAAA
GATTTGATCT CTCAAGGTGG TGGCATCTTC TCTCGTCGAT CAAAATCGAT CCAGTTGACA
CCAGAAATTC AGAAAATGTT AGGTACTAAG AAAGCATCTT TAGCGCCTAA TGATCTGATT
AAGATGATCT TGAAAATGAA AGTCGATCTG CTTTGGAATG GTGGTATTGG CACTTACGTT
AAAGCCTCGA CAGAAACTCA TACGGATGTT GGTGACCGTG CTAACGACAT GCTACGCATT
GACGGCCGTG ACTTAAGAGC AAAAGTAGTT GGCGAAGGCG GTAACTTGGG TATGACTCAG
CTTGGTCGTA TTGAATACGC ACTGACTGGC GGCCGAGTGA ACACAGACTT CGTTGATAAC
GTGGGTGGCG TTGACTGTTC GGATAATGAA GTCAACATCA AGATCTTCCT TAATGGACTG
GTTTCAAATG GCGATCTTAC GGTTAAGCAA CGTAACCAAA TTCTAGAGTC TATGGAAGAC
GAAGTGGGTG AAATTGTCTT AGATGATGCT TACCGTCAGT CGGAGTCGAT CTCCGTGACT
GAACAGCAAG GTGTTGGCAT TGTTAAGGAA CAAATTCGAT TCATCCATAC CATGGAAAAA
GCAGGGTACT TGGATCGTGC TCTCGAATAC ATCCCTGATG ATGAAACGCT AATCGAGCGT
GAAAAACAGG GACTAGGTCT GACTCGCCCT GAGCTATCAG TGTTAGTTGC CTACGGTAAA
ATGGTACTTA AACAGCAACT TGTTACGGAT GAAATCGCGA ATGATGAATT CCATGCGAAA
CAGCTTGTTG AATATTTCCC AAGTGCGTTA CGACGTAACT ATAAAGATCA AATGGTTAAT
CACCCACTGC GAGCTGAAAT TATCGCTACA GCATTGGCTA ACCAGATGGT TAATGAAATG
GGCTGTAATT TCGTCACTCG TTTGCAAGAA GAAACCGGTG CAAGTGTTGT CGATATTGCT
AACGCATACA GTGCGGCTCG TGAAATTTTC GATCTAGAAG CAATTCTTAA GCAGACTCGT
GAACTCGATA ATACCGCCAC AGCTCAAGCT CAGTACGAAA TCATGTTTTA TGTTCGTCGA
GCACTACGTC GAATTGCACG TTGGTTGCTT CGCAACCGCA GTGGTAAATG CACAGTTGGT
GAGCTGATTG CTATCTACAA GCAAGATGTC AATGTTATCA CTGAAACCTT AGACACTATG
CTGGTTGAGT CTGAAGTAGA AGAACACAAT GAACTTGCTC AAGGGTGGAT TGAGAAAGGG
GTAGAAGAGA AACTTGCACA TCAAGTCGCT CGTTTATCCA GCTTACAATC TGCACTGGAT
ATCTCATCAG TGGCGAGTGA AACAGGTAAA ACGGTTGAGC AAGCATCGAA GCTCTACTTT
AACTTAGGTG ACCGTTTGTC GTTACACTGG TTCTTGAAGC AAATTAACAG CCAAGCCGTT
GATAATAACT GGCAGGCACT GGCAAGAGCT GCATTCCGAG AAGATCTGGA CTGGCAACAA
CGTCAACTTA CGGCTCAGGT ATTAAATTGC GGCTGTGCAA CGGAAGAGCT AGACGTGATG
AAAGCGTTAG AAGATTGGAT GGAAACTAAC GAGCAATCAC TGCACCGTTG GGAAAGCATC
TTGAATGAGT TCAAAGTTGG CTCTGTCCAC GAATTTGCTA AGTTTTCTGT AGCACTTCGA
GAATTAGTAC TCTTGAATCT CAACTGTTCG TCGAAAGAGT AG
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| Protein sequence | MTARENVVPV LLEKVYQLIQ DKLELSHQTL VTKLAQHLFS NIADDDLIQR NESDLYGAVV
SLWHHINEKK PEEISVRVFN PTVSRQGWQS THTIVEIVVP DSPFLVDSVK MALARLDLVC
HLMLNNPTQI QRDKKGQVTD VNGEGGVLQS LFHIEVDRLT SKEEMQALKE ELLKILSDTR
LVVDDWKQMV DKLKLVTDEL EKNKDRVSIQ TDRMDETIAF LRWLEDHNFT FMGYKDYDLE
EVNGDTELVP AKEKGLGLFA DDKRVRSVKL SELSDSARLE AKKPYALIIT KGNKASRIHR
PAYTDYIGIK KFDENGKVIG EHRFTGLYTS AVYNQAVQSI PLIREKVDRI LEASGYRHGS
YSYKALHNIL ENYPRDELLQ ANEEELLEVG MGVVQMQDRD LLRLFVRKDP FGRFFSCMVY
VTKDRYNTEL RRQTQRILKQ YFGCEQEVEF TTFFSESPLA RTHYIVRVDN NNIDVDVKKI
EQNLMEVSTS WDDRLKESII ANFGESKGLP LSKEYMSAFP RSYKEDMMPG SAVADIERLE
ALSDDNKLGM LFYRPQEEGA DSKAVRLKLY HRDEPIHLSD VMPMLENLGL RVIGESPYEI
EKNNGQTFWI LDFSMLHKSE KTVDLREARD RFQQAFAAIW AGNLESDGFN RLVLGASLSG
REISILRAYA RYMRQVGFPF SQQYIEDTLS HYPDLATGLV KLFTKRFDPK HKGSEKGQND
LIKKLTEQLD RVESLDDDRI IRRYIDMIMA TLRTNYYQLD ESKQPKPWLS LKMKPSDIPE
IPQPVPAFEI FVYAPDIEGV HLRGGKVARG GLRWSDRQED FRTEILGLVK AQQVKNTVIV
PVGAKGGFVC KRQPSLTTRD EIFAEGQRCY KRFIRALLDV SDNIIEGEVV PPQNVVRHDE
DDPYLVVAAD KGTATFSDLA NSVSAEYNFW LGDAFASGGS NGYDHKAMGI TAKGGWESVK
RHFREMGINC QTTDFTAIGV GDMAGDVFGN GMLLSKHILL QAAFNHMHIF IDPNPDSATS
WEERNRLFNL PRSSWEDYNK DLISQGGGIF SRRSKSIQLT PEIQKMLGTK KASLAPNDLI
KMILKMKVDL LWNGGIGTYV KASTETHTDV GDRANDMLRI DGRDLRAKVV GEGGNLGMTQ
LGRIEYALTG GRVNTDFVDN VGGVDCSDNE VNIKIFLNGL VSNGDLTVKQ RNQILESMED
EVGEIVLDDA YRQSESISVT EQQGVGIVKE QIRFIHTMEK AGYLDRALEY IPDDETLIER
EKQGLGLTRP ELSVLVAYGK MVLKQQLVTD EIANDEFHAK QLVEYFPSAL RRNYKDQMVN
HPLRAEIIAT ALANQMVNEM GCNFVTRLQE ETGASVVDIA NAYSAAREIF DLEAILKQTR
ELDNTATAQA QYEIMFYVRR ALRRIARWLL RNRSGKCTVG ELIAIYKQDV NVITETLDTM
LVESEVEEHN ELAQGWIEKG VEEKLAHQVA RLSSLQSALD ISSVASETGK TVEQASKLYF
NLGDRLSLHW FLKQINSQAV DNNWQALARA AFREDLDWQQ RQLTAQVLNC GCATEELDVM
KALEDWMETN EQSLHRWESI LNEFKVGSVH EFAKFSVALR ELVLLNLNCS SKE
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