Gene VEA_003429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003429 
Symbol 
ID8557162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2009497 
End bp2009970 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content43% 
IMG OID646406524 
Productfree methionine-(R)-sulfoxide reductase fRMsr 
Protein accessionYP_003286054 
Protein GI262394200 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000333189 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAG AACAATACCA TAGACTAACC AAACAAGCCG TTGCTCTAAT TGAGTCTGAG 
CCAGACTTTA TTGCTAACCT AGCAAACTTG AGCTCACTGC TTTTCATGGA ATTGGACGAT
CTTAACTGGG CTGGCTTTTA CCTAGCAAAA GGTGAAGAGC TCATTCTTGG TCCGTTCCAA
GGAAAACCAG CTTGTGTCCG CATTCCTATG GGGCGCGGTG TCTGTGGTAC TGCTGCAAAA
ACTAACACCA TACAAAGAGT ATACGACGTT CATGAATTTG AGGGACATAT AGCGTGCGAT
GCAGCGAGCA ATTCAGAAAT TGTGATTCCA TTTTCTATTA ATGGAAAGGT GGTTGGTGTC
CTTGATATTG ACAGCCCAAG TATTGGTCGA TTCAATGAAA CAGACGAAGA AGGTCTCACT
CATTTCATGG CTGAAGTAGA AAAGCTGCTT AATTCACACG CGAACGACGC ATAA
 
Protein sequence
MNIEQYHRLT KQAVALIESE PDFIANLANL SSLLFMELDD LNWAGFYLAK GEELILGPFQ 
GKPACVRIPM GRGVCGTAAK TNTIQRVYDV HEFEGHIACD AASNSEIVIP FSINGKVVGV
LDIDSPSIGR FNETDEEGLT HFMAEVEKLL NSHANDA