| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003418 |
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| Symbol | |
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| ID | 8557151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1994469 |
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| End bp | 1995497 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406513 |
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| Product | amino acid ABC transporter amino acid-binding protein |
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| Protein accession | YP_003286043 |
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| Protein GI | 262394189 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.49248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATA AACTCACAGT TCTTGCTTCC GTCGTAGCGG CTTCTACTGC GATGATGGCA
ACATCAGCTC AAGCAGCAGA CACTACTCTG GACAAAGTCA CAAAACAAGG TTTTCTTACT
TGTGGCGTAA GTACCGGTCT ACCTGGTTTC TCTAACCCTA ACTCAAAAGG TGAATGGGAA
GGTATCGACG TAGAATATTG CCAAGCACTG GCTGCAGCCG TTCTTGGGGA TAAAACGAAA
GTTAAATATG TACCCCTAAC CGCGAAAGAA CGTTTCACTG CGCTTCAATC AGGTGAGATT
GATGTGCTTT CTCGTAACAC CACCTGGACA CTGCATCGTG ATACTGCACT TGGCCTAAAC
TTCGTAGGGG TAAACTACTA CGATGGCCAG GGCTTCATGG TGAAGAAAGA TCTTGGCATC
TCAAGCGCAA AAGAGCTTGA TGGTGCATCA GTTTGCGTAC AGTCCGGTAC AACAACTGAG
CTGAACCTTG CTGACTACTT CCGTAACAGC GGTATGTCAT ACAAGCCGGT CGTATTCGAT
ACGGCAGCCC AAACGTCAAA AGGTTTCGAT GCAGGACGTT GTGATGTGTT AACGACTGAC
CAATCTGGTC TTTATGCATT GCGTCTAAAC CTGAAAGATC CCTCTTCTGC AGCCGTTCTT
CCGGAAATCA TTTCCAAAGA ACCACTAGGT CCCGTCGTTC GTCAAGGTGA TGACCAATGG
TTCAACATTG CGAAGTGGAC ATTATCAGCA ATGATTAACG CCGAAGAGTA TGGTATTAGT
TCGAAAAATG CGGATGAAAT GCTGAAATCG AAAGATCCAA ACATCAAACG TATTCTTGGT
GTTGACGGTC CGAAAGGCAA AGGTTTGGGT ATTCGTGATG ATTGGGGCTA CCAAGTTATC
AAGCAAGTCG GTAACTATGG TGAAAGCTTC GAACGCACAG TCGGTACTGG TTCGCCGTTA
GAAATTTCTC GTGGCGTTAA TGCGCTATGG AATGCAGGCG GCTTTATGTA CGCGCCACCA
ATCCGATAG
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| Protein sequence | MANKLTVLAS VVAASTAMMA TSAQAADTTL DKVTKQGFLT CGVSTGLPGF SNPNSKGEWE
GIDVEYCQAL AAAVLGDKTK VKYVPLTAKE RFTALQSGEI DVLSRNTTWT LHRDTALGLN
FVGVNYYDGQ GFMVKKDLGI SSAKELDGAS VCVQSGTTTE LNLADYFRNS GMSYKPVVFD
TAAQTSKGFD AGRCDVLTTD QSGLYALRLN LKDPSSAAVL PEIISKEPLG PVVRQGDDQW
FNIAKWTLSA MINAEEYGIS SKNADEMLKS KDPNIKRILG VDGPKGKGLG IRDDWGYQVI
KQVGNYGESF ERTVGTGSPL EISRGVNALW NAGGFMYAPP IR
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