| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003416 |
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| Symbol | |
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| ID | 8557149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1993045 |
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| End bp | 1994250 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406511 |
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| Product | amino acid ABC transporter permease protein |
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| Protein accession | YP_003286041 |
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| Protein GI | 262394187 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000534635 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGA CAAAAGATGC ATCGCCAAGT ACGATGTCCA AACCGAGCGG AAGCAAGAGC
TTGATTTATA ATCCCGCCTT TCGTTCTGCT ATTTTCCAGA TCATTGCCAT AGCTGCACTG
GTATTTTTCT TTTACACGAT TATAAATAAC GCACTGAACA ACTTAGATGC TCGTGGGATC
GCTACGGGTT TCGGTTTTTT AAATCAAGAA GCCGGGTTTG GTATCGGGCT GACGCTAATT
GAATACGATG AAACGTATTC TTACGGCAGA ACGTTTATTA TTGGCCTTCT TAATACAGCG
CTGGTCTCCG TATTAGGTAT TATTCTGGCT ACCGTGATTG GTTTTACCAT GGGGGTTGCT
CGCCTTTCTT CTAACTGGTT AGTGAGTCGC TTGGCTGCTG TTTATATCGA AACGTTCCGA
AATATCCCAC TTCTTCTACA AATATTTTTC TGGTATTTCG CTGTTCTTCA AGCATTACCC
TCACCGCGTC AAAGCTTGAG CCTTGGCGAA GCCATCTTCT TGAATGTTCG TGGTTTATAT
TTTCCAGCAC CAGAAATGGA GCCAGGCAGT GGCTTTGTTA TTGCTGCATT AATCTTCGGG
GTGATCGCCA GCTTGTTGAT TAATGTATGG GCGAATAACA AGCAACGCCT AACTGGGCAA
CAAACGCCAA TGGGAAGAAT AGCTTTAGGC TTAGTCGTTG GCCTTCCGCT GATTGTCTAC
TTCCTTGCTG GTATGCCAAT TTCACTAAAT TATCCTGAAC TGAAAGGGTT TAACTTCCAA
GGTGGTATTA GCATTATTCC TGAACTTGCC GCACTACTTT TGGCATTGAG CGTTTATACC
GCCTCCTTCA TTGCCGAAAT TGTACGTTCT GGTATTAATG CGGTTAGCCA TGGTCAAACG
GAAGCGGCGA TGTCGCTGGG CTTACCACGC GCGAAAACTT TAAAGCTTGT TGTCATTCCG
CAAGCGTTAC GAATTATTAT TCCACCTTTA ACCAGTCAAT ATCTCAACCT CACCAAAAAC
TCATCGTTAG CGATGGCGAT TGGTTACCCA GACCTTGTCT CTGTCTTTGC TGGTACTACC
CTGAACCAAA CTGGGCAAGC GATTGAGATC ATTGCGATGA CGATGGGCGT GTACTTAACC
TTAAGTTTGA TTACGTCTGC ATTAATGAAC TTGTATAACC GTAAAGTCGC GCTGGTGGAG
AGATAA
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| Protein sequence | MKPTKDASPS TMSKPSGSKS LIYNPAFRSA IFQIIAIAAL VFFFYTIINN ALNNLDARGI
ATGFGFLNQE AGFGIGLTLI EYDETYSYGR TFIIGLLNTA LVSVLGIILA TVIGFTMGVA
RLSSNWLVSR LAAVYIETFR NIPLLLQIFF WYFAVLQALP SPRQSLSLGE AIFLNVRGLY
FPAPEMEPGS GFVIAALIFG VIASLLINVW ANNKQRLTGQ QTPMGRIALG LVVGLPLIVY
FLAGMPISLN YPELKGFNFQ GGISIIPELA ALLLALSVYT ASFIAEIVRS GINAVSHGQT
EAAMSLGLPR AKTLKLVVIP QALRIIIPPL TSQYLNLTKN SSLAMAIGYP DLVSVFAGTT
LNQTGQAIEI IAMTMGVYLT LSLITSALMN LYNRKVALVE R
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