| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003415 |
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| Symbol | |
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| ID | 8557148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1991946 |
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| End bp | 1993043 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406510 |
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| Product | amino acid ABC transporter permease protein |
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| Protein accession | YP_003286040 |
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| Protein GI | 262394186 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000100001 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTC ATCAATTTCA ACCGGATCTC CCACCACCAG CCAATACCGT CGGTTTTGTT
GGTTGGATGC GGAAAAACCT ATTTAATGGA CCTGTCAATT CCATTGTTAC CGTAATTCTT
GCTTATCTTG TCTTTAGTGC AATTTGGCAT ATCGTTGATT GGGCGTTTAT CAACGCGGAC
TGGATTGGTT CGACGCGTGA CGATTGCAGC CGAGAAGGTG CTTGCTGGGT ATTTATCAGC
GTGCGCTGGG AGCAGTTCAT GTACGGTTTC TATCCTGAGT CTGAACTGTG GCGCCCTCGC
CTTTTCTATA TCACATTGGC TATATTTACT GTGTTGCTAG CGTATGAAAA GACACCGAAA
CGGATTTGGA TTTGGCTTTT CTTCGTAAAC ATCTACCCAT TCATTATCGC TGGGCTGTTA
TATGGTGGGA TATTTGGGCT AGAAGTGGTC GATACACACA AATGGGGCGG ATTACTCGTT
ACGCTCATTA TTGCGCTAGT CGGTATTGTC GTTTCATTAC CGATTGGTGT GGTACTCGCG
CTCGGTAGAC GTTCAGAGAT GCCCATCATT CGCAGTATTT GTACCGTCTA TATTGAAGTT
TGGCGTGGTG TGCCACTGAT TACCGTTCTG TTCATGGCTT CCGTTATGCT GCCTTTGTTT
ATGTCCGAAG GATCAGAGAC AGACAAACTT ATTCGCGCTC TTATTGGTGT GGTGATGTTT
GCCTCGGCGT ACATGGCCGA AGTGGTACGG GGCGGCTTAC AAGCGATTCC AAAAGGCCAA
TATGAGGCTG CCGACGCACT TGGGTTAAGT TACTGGAAAA AAACAGGGCT TATTATCTTG
CCGCAAGCGC TGAAGATTAC GATCCCTTCT ATCGTGAACA CGTTTATCGG ATTGTTTAAA
GACACCAGTT TGGTTCTTAT CATTGGTATG TTTGACGTAC TAGGTATAGG ACAAGCAGCA
AACACAGACC CTGACTGGCT AGGCTTTGCT ACTGAAAGTT ATGTATTTGT CGCGTTAGTG
TTTTGGGTAT TTTGTTTTGG CATGTCGCGT TATTCGATAT GGCTTGAAAA CAAACTTCAT
ACCGGTCACA AACGATAA
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| Protein sequence | MSTHQFQPDL PPPANTVGFV GWMRKNLFNG PVNSIVTVIL AYLVFSAIWH IVDWAFINAD
WIGSTRDDCS REGACWVFIS VRWEQFMYGF YPESELWRPR LFYITLAIFT VLLAYEKTPK
RIWIWLFFVN IYPFIIAGLL YGGIFGLEVV DTHKWGGLLV TLIIALVGIV VSLPIGVVLA
LGRRSEMPII RSICTVYIEV WRGVPLITVL FMASVMLPLF MSEGSETDKL IRALIGVVMF
ASAYMAEVVR GGLQAIPKGQ YEAADALGLS YWKKTGLIIL PQALKITIPS IVNTFIGLFK
DTSLVLIIGM FDVLGIGQAA NTDPDWLGFA TESYVFVALV FWVFCFGMSR YSIWLENKLH
TGHKR
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