Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003406 |
Symbol | |
ID | 8557139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1977998 |
End bp | 1979269 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646406501 |
Product | agglutination protein |
Protein accession | YP_003286031 |
Protein GI | 262394177 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTTTAC CCGTTTTCGG TCAAACTTTA GAGCAAGCCG TGGCATTGAC GTTAAAAAAC AATCCTGACA TTAAGAGCGC ATTTAACGAG TTCACCAGTC GAAAATACGT AAATGAAGCC TCTTCGGGCG CCTACTTACC TTCTATTGAT TTAGATGCGG GCATTGGTTA CGAGGGATTA GACCCTTCTG ACGAGGTGGG ACGTGGGGAT ACAGATTACA CTCGAAAGGA AGCTTCGGTA ACACTAACTC AGCTCATATG GGATGGCAGT GCAACCTTAA ATGATATCGA TCGTACCGCA GCCGATGCAG AGTCAGTTAG ATTTCAACTT TTGGCCGATG CATCAGATAA AGCGCTTGAA GTCACCAAAG TGTATTTAGA CGCAGTAAAA GCTTACGAAA TACTCAAGCT TTCTGAAAAT AACTTGGCGG TTCACAAAGA TATTTACGAA GACATTAAAA AACGAGTCAA CTCAGGTATA GGCTCTACCG CTGACTTAAC ACAGGTAGAA GCACGTTTGG CAAAAGCACA CGGTAATTTG GCAGCTGCTC AAAATAATTT GTACGACTCT CACACTATGT TCACTCGTTT AGTGGGTCAA ACCCCGCAAG GGTTGAGCTT TCCAAGAGCG GATCAGAATT TCATTCCATA CACCATTGAT GAAGCGGTAG GTTTGGCATT TGAGCTGCAC CCTGTCATTC AGGTCGCGCT CGCAGACGTA GATTCGGCTA AGTTTCAATA CAAACAATCT AAAGGTGTTA ATTACCCAAC CATTTCCATT GAAGCTTCAC AAACATGGCG TGACGACGCT GATGGCTTAA AAGGCCGCAG TGATGAGACT CTTGCCATGC TACGTCTACG CTACAACCTA TTTAATGGCG GCAGTGACGC TGCAAACTCA GAAAACTTCG CCTATCAGTT AAATAAAGCG AAAGACTTAC GTGAAGGTGC TTATCGCAAT GTTGAAGAAG GGTTAAGGCT TTCATGGAGC GCACTGGATT TGACCCTACA GCAAAAAGAG TTCCTGTCAG ATCATGTAGA CTCGGCATCT GAAACCGTTA TTGCGTATGA AAAACAATAT CGCATTGGTA AGCGAACACT GCTTGATCTA TTGAATACTG AAAACGAACT CTTTGAGGCA CGTAAAGACT ACTTAGATTC TAAATACGCA GAGCAGTACG CCAAATATCG AGTGATGAAC GCAACAGGTC AACTGTTGAG TGCATTAAGG GTTGAAATGC CTAAAGAATG GCTAGAAGAA GTGGAGTATT AA
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Protein sequence | MSLPVFGQTL EQAVALTLKN NPDIKSAFNE FTSRKYVNEA SSGAYLPSID LDAGIGYEGL DPSDEVGRGD TDYTRKEASV TLTQLIWDGS ATLNDIDRTA ADAESVRFQL LADASDKALE VTKVYLDAVK AYEILKLSEN NLAVHKDIYE DIKKRVNSGI GSTADLTQVE ARLAKAHGNL AAAQNNLYDS HTMFTRLVGQ TPQGLSFPRA DQNFIPYTID EAVGLAFELH PVIQVALADV DSAKFQYKQS KGVNYPTISI EASQTWRDDA DGLKGRSDET LAMLRLRYNL FNGGSDAANS ENFAYQLNKA KDLREGAYRN VEEGLRLSWS ALDLTLQQKE FLSDHVDSAS ETVIAYEKQY RIGKRTLLDL LNTENELFEA RKDYLDSKYA EQYAKYRVMN ATGQLLSALR VEMPKEWLEE VEY
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