Gene VEA_003405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003405 
Symbol 
ID8557138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp1977381 
End bp1977995 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content45% 
IMG OID646406500 
Productouter membrane protein 
Protein accessionYP_003286030 
Protein GI262394176 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA TAACTCTTAT TGCACTCTCA TTGATGATTT CGGCATGCAG TTCATCCGAT 
AAAGGCGATG AATATGATTA TATTGATACG CCAATTGCCG ATCAGTGGGC AGATCATCTT 
GATGATGATT CTGATGGAGT CATTAATGAG CGCGATTTAT GTCCGGGTAC TCCTTTAGGT 
GCCGAGATTG ATAACGATGG CTGCGGTTCG TATGTCGACT CCTCGCAAGA AATGCAAATT 
CGAGTTCTGT TCGCGAATGA TTCCGATGTG ATCAATCCTA TCTTTACGGA GCAAATTCGA 
GAACTATCCG ACTTCTTGAA GGAGTATCCA AATACATCGA TAGAGATTCA GGGCTATGCC 
AGTCGTACTG GTACTGCAGA ACACAATCTT GACTTATCTA AACGCCGCGC TGAGAACGTT 
AGAAAAGAAC TCATGATGAA TGGTATTAGT GGAGATAGAG TCACCATTGT CGGCTATGGA 
GACACGGTAC TTGCAACACA AGGCACCGAC CAAGTGAGTC ATGCGTTGAA CCGTCGAGTC 
ACCGCAACGG TGATTGGCCA CAAAGGTGAA GTGAAGAAAG AGTGGACCGT TTTCACGACA 
CTTCCTAAGA GCTAA
 
Protein sequence
MKYITLIALS LMISACSSSD KGDEYDYIDT PIADQWADHL DDDSDGVINE RDLCPGTPLG 
AEIDNDGCGS YVDSSQEMQI RVLFANDSDV INPIFTEQIR ELSDFLKEYP NTSIEIQGYA 
SRTGTAEHNL DLSKRRAENV RKELMMNGIS GDRVTIVGYG DTVLATQGTD QVSHALNRRV 
TATVIGHKGE VKKEWTVFTT LPKS