| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003403 |
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| Symbol | |
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| ID | 8557136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1961036 |
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| End bp | 1962346 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406498 |
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| Product | agglutination protein |
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| Protein accession | YP_003286028 |
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| Protein GI | 262394174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000998881 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTGGA CTCGTGCCAA CGCCTTTTGC ATTGGTGTGT TCGCAGCTAG TCATGCTTTT
GGGCAAACAC TAGAGCAAGC GGTTGAAAAC ACATTAAAAA CCAATCCTGA CATCAAAAGT
GCGTTCAATG AATTCGTTAG CAAGCAGTAT GTGAATGAAG CATCTGGCGG TGCTTACCTC
CCATCCGTAG ATTTAGACGC CGGTATCGGT TATGAAGGCA TTAACCCAGC AGAAGCAGGG
CGAGATTCAA CGGATCTGAC AAGAAAAGAA GCGACCGTGA CACTAACCCA GTTGATATGG
GACGGTTCTG CGACACTTAA CGATATGGAT CGAACAGCAG CTGACGCAGA ATCAGTTCGT
TATCAACTGC TCGCTGATGC TCAAGACACG GCACTCGAAG TGGCAAAGGT TTACTTAGAT
TCAGTAAAAG CTTATGAAAT TCTTACACTT TCAGAAAACA ACTTGAAGGT TCATAAGAAG
ATCTACGAAG ACATTAAAAA GCGAGTTAAC TCAGGACTTG GGTCTACCGC TGACCTAACT
CAAGTAGAAG CTCGTTTAGC AAAAGCTCAC GGTAACTTGG TGGCGGCTCA GAACAACTTA
TATGACAGCC ACACCACGTT TACACGCCTT GTCGGACAGT CCCCACAAGG ATTGATTTTT
CCGCGAGCGG ACCAGAACTT TATTCCCTAC ACCATAGATG AAGCAATTGA CTTGGCATTT
GAATCGCATC CAGTAATCAA AATTTCGATG GCAGATGTAG ACTCAGCTAA GTTCCAATAT
AAGCAATCTA AGGGAACTTA CTATCCAACG ATATCTGTAG AAGCGGCTCA AACGTGGCGT
GATGATGCAA GCGGTATCGA AGGAAGCAGT GATGAAACGA CAGCGATGCT GCGTATGCGT
TATAACCTCT TTAATGGTGG TAGTGATGTC GCCAATGCTG AAAACTTTGC CTATCAACTA
AACAAAGCCA AAGATTTACG AGAACGCGCA TACCGCAGCG TTGAAGAAGG GCTTCGTCTA
TCATGGAGCG CGTTAGATTT AACGCTTCAG CAAAAAGAGT TTCTGGCGGA TCACGTAGAT
TCGGCATCTG AAACTGTTAT CGCCTACGAG AAACAGTATC GCATCGGTAA ACGAACCCTT
TTGGATTTGT TAAATACTGA AAACGAGTTA TTTGAAGCGA GAAAAAACTA CTTGGATGCT
CGATATTCAG AGCAATACGC GAAATACCGT GTAATGAATG CGACCGGCCA ATTGTTAAAT
GCCTTGCGAG TCGATGTGCC TACGGAATGG AATGAAAAGG TGGAGTACTG A
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| Protein sequence | MKWTRANAFC IGVFAASHAF GQTLEQAVEN TLKTNPDIKS AFNEFVSKQY VNEASGGAYL
PSVDLDAGIG YEGINPAEAG RDSTDLTRKE ATVTLTQLIW DGSATLNDMD RTAADAESVR
YQLLADAQDT ALEVAKVYLD SVKAYEILTL SENNLKVHKK IYEDIKKRVN SGLGSTADLT
QVEARLAKAH GNLVAAQNNL YDSHTTFTRL VGQSPQGLIF PRADQNFIPY TIDEAIDLAF
ESHPVIKISM ADVDSAKFQY KQSKGTYYPT ISVEAAQTWR DDASGIEGSS DETTAMLRMR
YNLFNGGSDV ANAENFAYQL NKAKDLRERA YRSVEEGLRL SWSALDLTLQ QKEFLADHVD
SASETVIAYE KQYRIGKRTL LDLLNTENEL FEARKNYLDA RYSEQYAKYR VMNATGQLLN
ALRVDVPTEW NEKVEY
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