| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003402 |
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| Symbol | |
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| ID | 8557135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1960419 |
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| End bp | 1961033 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406497 |
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| Product | outer membrane protein |
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| Protein accession | YP_003286027 |
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| Protein GI | 262394173 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000500846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCAA TGAAAATTCT ATTTGTATTA AGTCTTCTCG CCGTTACTCA ACAGGTTGCT
GCTGAAGACG AGTATGACTA TCGACCTGTA CCAAGTGCAG AGCAAATTGC TGACCTTCAA
GATGAAGATA ACGATGGCGT CATCAACGCT CGAGATATGT GCCCTGGCAC ACCGGAAGGC
TCAGAAGTCG ATAATGACGG TTGCGGCGAA TACATTAAAG CATCAGATAA CATGCAAGTA
AGAATACTTT TTGCCAATGA TTCTGATGAA ATCAATCCCG TGTTCAGAAG ACAAGTACGT
GAACTGTCCG ATTTTTTAAA AGAATACCCT ACTACGTCGA TCGAACTGCA CGGCTACGCG
AGTAAAGTTG GTGGCTCTCA ACACAACCAA GATCTATCAG AGAGACGAGC ACGCAATGTC
CGTGAGGCGC TATTGAGCTA CAACATCGAA CCGAGCAGAG TTCGTATTGT TGGCTTTGGA
GATACTCACC TAGCGCAACA AGGTACCGAT GAAGTCAGCC ACGCTTTAAA CCGCCGAGTA
ACTGCTTCTG TCGTTGGTTA TAAAGGCGAG ATTAAAAAAG AGTGGACAAT ATTCACTACC
CTCCCTGAAA GGTAA
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| Protein sequence | MKPMKILFVL SLLAVTQQVA AEDEYDYRPV PSAEQIADLQ DEDNDGVINA RDMCPGTPEG
SEVDNDGCGE YIKASDNMQV RILFANDSDE INPVFRRQVR ELSDFLKEYP TTSIELHGYA
SKVGGSQHNQ DLSERRARNV REALLSYNIE PSRVRIVGFG DTHLAQQGTD EVSHALNRRV
TASVVGYKGE IKKEWTIFTT LPER
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