| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003390 |
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| Symbol | |
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| ID | 8557123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1945417 |
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| End bp | 1948008 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646406485 |
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| Product | 2-methylcitrate dehydratase FeS dependent |
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| Protein accession | YP_003286015 |
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| Protein GI | 262394161 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.828333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAA ATATTAATAC CCAATATCGT AAGCCGCTTC CGGGAACTCA ACTGGATTAC
TTTGATGCAC GCGAAGCCGT CAATGCCATT TCTCCTGGAG CCTATGAAAA ACTCCCTTAT
ACCTCCCGCG TGCTAGCTGA GCAACTGGTC CGTCGCTGTG AACCGAACAC ATTGACGGAT
AGCCTGAAAC AGTTAATTGA ACGTAAGCGT GATCTTGATT TTCCTTGGTA TCCAGCACGC
GTTGTTTGTC ATGACATTCT TGGTCAGACC GCTCTAGTCG ATTTAGCGGG TCTGCGCGAT
GCCATTTCGG ATCAGGGCGG CGACCCTGCA AAAGTGAACC CTGTGGTTGA GACTCAGCTG
ATCGTCGACC ACTCTTTAGC GGTTGAGCAT GCGGGCTTTG ACCCTGACGC CTTCGACAAA
AACCGCGCGA TTGAAGAGCG CCGTAATGAA GACCGATTCC ACTTTATCGA GTGGTGTAAA
ACAGCGTTTG AGAACGTAAG CGTGATTCCT GCGGGTAACG GCATCATGCA CCAAATCAAC
TTGGAGAAAA TGTCTCCTGT GGTGCAAGCG AAGCAGGGTA TTGCCTACCC AGATACCTGT
GTGGGTACGG ACAGTCACAC GCCGCACGTT GATGCATTGG GCGTTATCGC GATCGGTGTT
GGTGGTCTGG AAGCTGAAAC CGTAATGCTT GGCCGACCAT CAATGATGCG TCTACCTGAT
ATTGTTGGTG TAAAACTAAC GGGTAAACGT CAACCAGGCA TTACCGCAAC GGATATTGTC
CTCGCGATTA CCGAGTTCTT ACGTAATGAG CGTGTTGTTT CTTCATATCT TGAATTCTTT
GGTGAAGGTG CACGCGATCT AACGATCGGA GACCGCGCAA CCATTTCCAA CATGACACCA
GAATACGGCG CGACAGCTGG CATGTTTTAT ATTGATGAGC AGACCATCAA TTACTTAAAA
CTAACTGGTC GAGATGAAGA GCAAGTTGCT CTAGTAGAAA AATACGCAAA ACAAACTGGT
CTTTGGGCAG ACGATCTTGA TACAGCGGTT TACGAGCGTG TACTGGAATT CGATTTATCA
TCAGTAAGTC GTAATATGGC CGGCCCGTCA AACCCTCACC GCCGTTTACC AACATCTGAG
TTGGCGCAGC GTGGCATTTC TGGTGCGTGG GAAGAGAAAG AAGGCGAACT GCCAGATGGC
GCAGTGATCA TCGCTGCTAT CACATCGTGT ACTAATACCA GTAACCCAAG AAACGTCGTC
GCTGCTGGCC TTGTCGCGAA GAAAGCCAAT GAGCTCGGCC TTGTACGTAA ACCTTGGGTG
AAATCGTCTT TTGCTCCGGG TTCTAAGGTA GCGCGTCTTT ACCTGGAAGA AGCGGGCTTA
TTACCAGAGT TAGAAAAGCT TGGCTTTGGT ATCGTCGGTT ACGCATGTAC CACTTGTAAC
GGCATGAGTG GCGCGTTGGA TCCAAAAATC CAGCAAGAGA TCATTGATCG CGATTTATAT
GCGACAGCCG TTCTGTCTGG TAACCGCAAC TTCGATGGCC GAATCCATCC TTACGCAAAA
CAAGCTTTCC TTGCATCACC ACCATTGGTT GTTGCTTATG CGCTAGCGGG TACGATTCGT
TTTGATATCG AGCGTGATGC ACTTGGCACT GACCAAAACG GTAAACCAAT TTACTTAAAT
GATTTGTGGC CAAGTGACGA AGAGATCGAT GCTGTGGTCG GCAAACACGT TAAGCCAGAG
CAGTTTAACC AAGTTTACAT CCAGATGTTT AAGCTCGATG ACGCAGAGAA AAGCTCTAGT
CCGCTTTACG ACTGGCGTCC GATGAGTACC TACATTCGCC GTCCACCTTA CTGGGAAGGT
GCGCTTGCGG GTGAAAGAAC ACTGTCTGGC ATGCGTCCAT TAGCGGTTCT TGGTGACAAC
ATTACCACCG ACCACTTATC GCCATCGAAT GCGATCATGG CGAGCAGCGC GGCGGGTGAA
TACCTTGCCA AAATGGGCGT ACCGGAAGAG GACTTTAACT CTTATGCGAC TCACCGTGGC
GATCACTTAA CGGCGCAACG TGCGACCTTT GCTAACCCGA AACTATTTAA CGAAATGGTG
AAAGAGAACG GTGAAGTCGT TCAGGGTTCT CTGGCGCGAA TCGAGCCAGA AGGTCAGGTT
GTACGCATGT GGGAAGCGAT TGAAACCTAC ATGAACCGCA AACAGCCACT GATTGTTGTC
GCGGGTGCAG ATTATGGTCA GGGCTCGTCT CGCGACTGGG CAGCAAAAGG CGTTCGATTA
GCTGGTGTAG AAGCCATCGT TGCAGAAGGT TTTGAGCGAA TTCACCGTAC TAACTTGGTT
GGCATGGGCG TGCTACCACT GCAATTTAAG CCGGGTGTTA ACCGCAATAC ATTAGAACTG
GATGGTACGG AACTTTACGA CGTAGTTGGC GAGATTAAAC CGGGTGCGGA TCTGGCCTTG
GTTATTACAC GTAGCAACGG TGAGAAAGTC GACGTTCCGG TTACTTGTCG CTTAGATACC
GCTGACGAAG TGCACGTGTA TAACGCAGGT GGTGTTTTAC AACGCTTTGC TCAAGATTTC
TTGGCGCAAT AA
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| Protein sequence | MNTNINTQYR KPLPGTQLDY FDAREAVNAI SPGAYEKLPY TSRVLAEQLV RRCEPNTLTD
SLKQLIERKR DLDFPWYPAR VVCHDILGQT ALVDLAGLRD AISDQGGDPA KVNPVVETQL
IVDHSLAVEH AGFDPDAFDK NRAIEERRNE DRFHFIEWCK TAFENVSVIP AGNGIMHQIN
LEKMSPVVQA KQGIAYPDTC VGTDSHTPHV DALGVIAIGV GGLEAETVML GRPSMMRLPD
IVGVKLTGKR QPGITATDIV LAITEFLRNE RVVSSYLEFF GEGARDLTIG DRATISNMTP
EYGATAGMFY IDEQTINYLK LTGRDEEQVA LVEKYAKQTG LWADDLDTAV YERVLEFDLS
SVSRNMAGPS NPHRRLPTSE LAQRGISGAW EEKEGELPDG AVIIAAITSC TNTSNPRNVV
AAGLVAKKAN ELGLVRKPWV KSSFAPGSKV ARLYLEEAGL LPELEKLGFG IVGYACTTCN
GMSGALDPKI QQEIIDRDLY ATAVLSGNRN FDGRIHPYAK QAFLASPPLV VAYALAGTIR
FDIERDALGT DQNGKPIYLN DLWPSDEEID AVVGKHVKPE QFNQVYIQMF KLDDAEKSSS
PLYDWRPMST YIRRPPYWEG ALAGERTLSG MRPLAVLGDN ITTDHLSPSN AIMASSAAGE
YLAKMGVPEE DFNSYATHRG DHLTAQRATF ANPKLFNEMV KENGEVVQGS LARIEPEGQV
VRMWEAIETY MNRKQPLIVV AGADYGQGSS RDWAAKGVRL AGVEAIVAEG FERIHRTNLV
GMGVLPLQFK PGVNRNTLEL DGTELYDVVG EIKPGADLAL VITRSNGEKV DVPVTCRLDT
ADEVHVYNAG GVLQRFAQDF LAQ
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