| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003388 |
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| Symbol | |
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| ID | 8557121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1943091 |
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| End bp | 1943987 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646406483 |
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| Product | methylisocitrate lyase |
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| Protein accession | YP_003286013 |
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| Protein GI | 262394159 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTAA CACCGGGAGC GAAGTTCAGA CTCGCTATTG AACAAAACAA TCCGCTGCAA
ATTGTTGGCA CCATTAACCC TTACTGCGCC ATGATGGCGA AAAATTTGGG GCATCAAGCG
ATTTATTTGT CTGGCGGCGG TATTGCAAAC GCGTCATACG GATTGCCGGA TCTCGGTATT
ACAACATTGA ACGACGTACT GGTCGATGTT GACCGCATCA CTAACGCGTG TGATTTACCG
CTATTGGTCG ACATCGACAC CGGTTTTGGA GGCGCATTTA ATATTGCCCG CACGATCAAA
GCAATGGAAA AGGCGGGTGC TGCTGCGGTT CATATGGAAG ACCAAGTCGC ACAGAAACGT
TGTGGGCATC GTCCGAACAA AGCAATTGTG AGCCAGCAAG AGATGGTTGA TCGCGTAAAA
GCCGCGGTTG ACGCACGCAA TGATGAAAGC TTTGTGATTA TGGCTCGTAC AGACGCGCTA
GCTGTTGAAG GTATGGACAG TGCAATTGAG CGTGCGATTG CCTGTGTGGA AGCAGGCGCA
GACATGATCT TCCCAGAAGC GATGACCAAG CTGGATCAGT ACCTTCAGTT CTCAAACGCA
CTTGAGCAAG CAACTGGAAA GCACGTTCCT ATTCTGGCCA ACATTACCGA GTTCGGCGCA
ACGCCACTTT ACGGCTGCGA TGAGCTTGCA AAAGCGAAAG TCGATATGGT GCTTTACCCA
TTAAGTGCGT TCCGTGCCAT GAACAAAGCC GCTGAAACGG TTTATAAGCA TTTGCTAGAA
GTGGGCAATC AGGAAGCTTT GGTTGATTCA ATGCAAACAC GCAAAGAGTT GTATCAGCAC
CTGAACTACC ACGATTACGA AGACAAACTT GACCAGCTAT TCTCTGAAGG AAAATAG
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| Protein sequence | MSLTPGAKFR LAIEQNNPLQ IVGTINPYCA MMAKNLGHQA IYLSGGGIAN ASYGLPDLGI
TTLNDVLVDV DRITNACDLP LLVDIDTGFG GAFNIARTIK AMEKAGAAAV HMEDQVAQKR
CGHRPNKAIV SQQEMVDRVK AAVDARNDES FVIMARTDAL AVEGMDSAIE RAIACVEAGA
DMIFPEAMTK LDQYLQFSNA LEQATGKHVP ILANITEFGA TPLYGCDELA KAKVDMVLYP
LSAFRAMNKA AETVYKHLLE VGNQEALVDS MQTRKELYQH LNYHDYEDKL DQLFSEGK
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