| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003382 |
|---|
| Symbol | |
|---|
| ID | 8557115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1938190 |
|---|
| End bp | 1939716 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646406477 |
|---|
| Product | putative tricarboxylic transport TctA |
|---|
| Protein accession | YP_003286007 |
|---|
| Protein GI | 262394153 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATG GAATTCTACA AGGTTTATCC ACTGCAGTAA TGCCAATGAA CATCATGATG
GTGATCGTTG GTTGTTTCGT CGGTACATTT ATCGGCATGT TACCTGGGCT TGGGCCGATC
TCAGCCATTG CTTTGATGAT CCCAGTTACT TATGGCCTAG AGCCCTCTTC TGGCCTTATT
TTGATGGCGG GTGTTTATTA CGGTGCGGTA TTTGGTGGTT CTACATCGTC GATTTTAATT
AACGCGCCGG GTTGTTCTTC AACCGTGGTG ACAGCATTCG ACGGCTACCC GATGGCTCAA
AAAGGCCAAG CAGGTAAAGC ATTAGCTTTG GCAGCTTATT CGTCTTTCAC TGGCGGTACG
CTATCTGCCA TTATGTTGCT TGTCGCAGCA CCAGCATTGG CTAGCGTTTC ACTTAGCTTC
CAATCGTCGG ACTATTTTGC GTTGATGCTA CTTGGGTTAT CAGCAGTCGC AGCTTTTGCT
GGGAAAGGTC AGGTCATCAA AGCGTGGATG ATGACCATTC TTGGTTTGAT GCTATCTACA
GTTGGTATCG ATAAAGGCGT AGGCGTTGAA CGCTTTACCT TCGGTTTGAC GGATTTAATG
GATGGCTTTA GCTTCTTGTT GCTTGCAATG GCGACATTCG CACTGGGTGA AACATTGATG
GGCATTCTTA AACCATCAAA AGACACCAGC GATGAAGAAC AGGAAAAGCT GAGTAACATT
GGCTCAATGA AAGTGACGAA GGAAGAAATC AAAGATGTTG CGCCTGTTTC AATTCGCTCT
TCAATATTAG GTTTCTTCAC TGGCGTTCTT CCTGGCGCAG GAGCAACCAT TGCTGCTTTT
TTAAGCTATG GTATGGAGCG CAACCTCGCA CCTAAAGAGA AAAAGGAAGA GTTCGGTAAA
GGCAGTATCC GTGGTTTGGT CGCGCCAGAA TCAGCGAACA ATGCAGCCTC TAGTGGTTCA
TTTGTACCGC TGCTAACGCT TGGCATTCCG GGGTCTGGTA CAACAGCAAT AATGCTCGGC
GCGCTGATCG CTTACGGTAT TCAGCCAGGC CCTCGCCTGT TTGTTGAACA TCCAGATGTG
TTCTGGTCGG TGATCATTTC CATGTACTTC GGCAACATCG TACTCGTGAT CCTGAACTTA
CCGTTGATTC CGTACATTTC AAAGCTTTTG GCGGTTCCAA GAACGGTACT TCTGCCGATG
ATTTTATTCT TCTCAATCAC CGGAGTTTAT TTGGTCTCAT TCAATACCAT GGATGTGTTC
GTGATGCTGA TTGTCGCTAT GGCTGCCATT GCACTTCGAC TCGCTAACTT CCCACTTGCG
CCTTTATTGC TGGGTTTCAT CCTTGGGGGA TTAATGGAAG AGAACTTACG CCGCGCATTA
ATGATTTCAG ACGGCGAATT GAGTTTCCTA TGGGAGCGCC CTATTACCCT TACCTTTACT
GTTTTAGCCG TATTGGTACT GGCAAGTCCA CTAATCGTAA AGCTGATTCA AAAGTTTAAA
GCACAGCCAG TGAGCGTTGA GCAGTAA
|
|---|
| Protein sequence | MLDGILQGLS TAVMPMNIMM VIVGCFVGTF IGMLPGLGPI SAIALMIPVT YGLEPSSGLI
LMAGVYYGAV FGGSTSSILI NAPGCSSTVV TAFDGYPMAQ KGQAGKALAL AAYSSFTGGT
LSAIMLLVAA PALASVSLSF QSSDYFALML LGLSAVAAFA GKGQVIKAWM MTILGLMLST
VGIDKGVGVE RFTFGLTDLM DGFSFLLLAM ATFALGETLM GILKPSKDTS DEEQEKLSNI
GSMKVTKEEI KDVAPVSIRS SILGFFTGVL PGAGATIAAF LSYGMERNLA PKEKKEEFGK
GSIRGLVAPE SANNAASSGS FVPLLTLGIP GSGTTAIMLG ALIAYGIQPG PRLFVEHPDV
FWSVIISMYF GNIVLVILNL PLIPYISKLL AVPRTVLLPM ILFFSITGVY LVSFNTMDVF
VMLIVAMAAI ALRLANFPLA PLLLGFILGG LMEENLRRAL MISDGELSFL WERPITLTFT
VLAVLVLASP LIVKLIQKFK AQPVSVEQ
|
|---|
| |