| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003377 |
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| Symbol | |
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| ID | 8557110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1931994 |
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| End bp | 1933193 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406472 |
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| Product | type III secretion host injection protein (YopB) |
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| Protein accession | YP_003286002 |
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| Protein GI | 262394148 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5613] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCTA TTGCACTTGA CCGCATCCAG ACGCAGGTTT ATAGCCCTGA ATCTGGCCAA
ACCACGTTAG ATAACGTGCA GAAAACGGCG TCTACAGCGA CGCCTTCTGT GACGGTAGAA
AACGTGAAGA GTAAAGATGC AGATGTACTG AACACTGGAA AAGTGAAAGT TCAGTTAGAT
GCACCTAACG CAGCTGTTAG CGACAAAGTG AATGATTTGA CGCTAAAAGC CATGGCACAG
CTGCAAAAGA TCGTCGATAC CATTGCAAAA TCTCTCCATG CAGTTGCAGA TCAAACAGGT
TCGATTGCAG TCAAAATCAT CGCAGGTTCT GCTGATGATT TTGAAGTAGA GCTTGCTGCT
ATCACGGATA AACTGAAAAG TGCTCAAAAC GAGCTGAAAA TTCAGGAAGT GAAGGTCGCA
AAAGCTAAGC ACGAAAAAGA GATGGTGGAA AACCAAGACA AAATCAAAGA ATCGGAAGCC
GCTGCAAAAG AAGCCCAAAA ATCAGGCTTA GCAGCGAAGA TCTTTGGTTG GATCAGTGCG
GTGGTTTCTA TTGTTGTTGG TGCCGTAATG GTGGCAACGG GTGTTGGTGC AGCAGCTGGT
GCTCTTATGA TCGCTGGTGG CGTCATGGGA GCAGTGAGCA TGGCGCTGCA AGAGCCAGCC
GTTCAAGATG CGCTAAAAGA AGCGGGCGTA AATGTCGATG TGCTAAACAA AGTCGTAATG
GCATTAGAAA TCGCAGTCGC GGTTATCGGA GCTGTTGTGA CGTTTGGTGG TGCAGCAGCT
GGCGGTATCG CGAAACTTGC AGCAAAAGGT GCTGGCAAGA TAGCTCAAAA GGTCACAGAA
ATCGCTACGA AAACAGCTGC AAATATGGCG AAAGTGGCGG ACATGGGCTC AAAAGCCGCG
ACAACGACCG CAAAAGCGAT TCGTTACGGA GCAGAAACTG TCGATATTGC CGTCAACGTA
GGTAAAGGCG CTACGGACAG TGTTCATGCC GCTAACAATG CTCACGTAAC TGAGATTCAG
GCAGATATCA CGGACCTTCG CGCCAAAATG ACCTTAAGCC AGGCCGTCAT CGACAAGCTT
AAAGAAGAAA TTGGCAAGTT GATGGAAGAT TTCCAAGAGC TGATGAGCGT CATCATGCAA
ATGATCCAAG CGAAAAGTGA AACCATGCAA ACGGTGTTAA GCCGTCCTGC AACGGTATAA
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| Protein sequence | MSSIALDRIQ TQVYSPESGQ TTLDNVQKTA STATPSVTVE NVKSKDADVL NTGKVKVQLD
APNAAVSDKV NDLTLKAMAQ LQKIVDTIAK SLHAVADQTG SIAVKIIAGS ADDFEVELAA
ITDKLKSAQN ELKIQEVKVA KAKHEKEMVE NQDKIKESEA AAKEAQKSGL AAKIFGWISA
VVSIVVGAVM VATGVGAAAG ALMIAGGVMG AVSMALQEPA VQDALKEAGV NVDVLNKVVM
ALEIAVAVIG AVVTFGGAAA GGIAKLAAKG AGKIAQKVTE IATKTAANMA KVADMGSKAA
TTTAKAIRYG AETVDIAVNV GKGATDSVHA ANNAHVTEIQ ADITDLRAKM TLSQAVIDKL
KEEIGKLMED FQELMSVIMQ MIQAKSETMQ TVLSRPATV
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