| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003366 |
|---|
| Symbol | |
|---|
| ID | 8557099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1923039 |
|---|
| End bp | 1924361 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 646406461 |
|---|
| Product | Type III secretion cytoplasmic ATP synthase |
|---|
| Protein accession | YP_003285991 |
|---|
| Protein GI | 262394137 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGATT TCTCATACAT CACTGATATC CAACAATCTG CGATCAGGCA AACTCGTCTG
ATCCAAATTC GCGGGCGCGT TACGCAAGTA ACCGGCACCA TCATCAAGGC CGTTGTCCCC
GGCGTTCGTG TTGGTGAGCT GTGTGAGTTG CGTAATCCTG ATCAAACTCT GTCTTTATTA
GCGGAAGTCG TTGGCTTTCA ACAGCATCAC GCTCTGCTCA CACCGTTAGG AAACATGTTT
GGGATTTCCT CAAATACAGA AGTTAGCCCA ATGGGAAAAA TGCATGAAGT CGGTGTTGGC
GATCAGCTGT TAGGTACAAC GCTTGATGGG CTTGGGCGTC CTTTCGATGG TACGCAAAGC
CAGGAACCAA GTGCCTGGTA TCCGGTTTAT CGCGATGCGC CACCACCAAT GCAACGTAAA
CTGATTGAAA AGCCAATCTC TCTTGGGGTT CGATCCATTG ATGGACTACT GACCTGTGGT
GAAGGTCAGC GCATGGGCAT TTTTGCAGCG GCGGGCGGTG GTAAAAGTAC CCTACTGGCA
AAACTGATTC GATCCGCAGA CGTCGACGTG ACCGTTCTCG CCTTGATTGG TGAACGCGGA
CGCGAAGTAC GAGAGTTTAT TGAGCATGAC TTGGGCGAAG AAGGAATGGC CAAATCGGTT
TTAGTGGTCG CGACATCCGA TCGCCCGGCC ATGGAACGTG CCAAAGCCGC TTTTGTTGCC
ACTTCTATTG CTGAATATTT TCGTGACCAA GGTAAACGCG TGTTACTGCT GATGGATTCT
GTAACGCGTT TCGCCCGCGC ACAGAGAGAA ATTGGCCTAG CCGCAGGTGA GCCACCAACA
CGACGCGGCT ATCCGCCTTC CGTTTTTGCC GCTTTGCCAA AGCTGATGGA ACGAGCCGGT
CAATCTGACA AAGGGTCAAT TACAGCGCTG TACACCGTGT TGGTTGAAGG CGACGACATG
ACAGAGCCTG TCGCCGATGA AACTCGCTCC ATTTTAGATG GGCACATCAT TCTCTCGCGC
AAGCTTGCTG CAATGAACCA TTATCCTGCC ATTGATGTAC TCCGTTCAGC AAGCCGCGTG
ATGAATCAGA TCGTTGAACC TGATCATCAG GCGTCTGCTG CTCACCTTCG CGAAATGTTA
GCCAAGTACG AAGAAGTTGA GCTACTGCTC AAAATTGGCG AGTACCAGCA TGGGGCGGAT
AGCCGAGCGG ATATGGCGAT TGCGCAAAGT GATGATATAC GCGCCTTTTT ACGCCAAGGA
ACGCATGAGC CAAGTGATCT TGATGGTGCT ATCGCTCAAC TAAAAGGGAT GGCGAACCAA
TGA
|
|---|
| Protein sequence | MNDFSYITDI QQSAIRQTRL IQIRGRVTQV TGTIIKAVVP GVRVGELCEL RNPDQTLSLL
AEVVGFQQHH ALLTPLGNMF GISSNTEVSP MGKMHEVGVG DQLLGTTLDG LGRPFDGTQS
QEPSAWYPVY RDAPPPMQRK LIEKPISLGV RSIDGLLTCG EGQRMGIFAA AGGGKSTLLA
KLIRSADVDV TVLALIGERG REVREFIEHD LGEEGMAKSV LVVATSDRPA MERAKAAFVA
TSIAEYFRDQ GKRVLLLMDS VTRFARAQRE IGLAAGEPPT RRGYPPSVFA ALPKLMERAG
QSDKGSITAL YTVLVEGDDM TEPVADETRS ILDGHIILSR KLAAMNHYPA IDVLRSASRV
MNQIVEPDHQ ASAAHLREML AKYEEVELLL KIGEYQHGAD SRADMAIAQS DDIRAFLRQG
THEPSDLDGA IAQLKGMANQ
|
|---|
| |