| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003364 |
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| Symbol | |
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| ID | 8557097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1921423 |
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| End bp | 1922571 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406459 |
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| Product | putative translocation protein in type III secretion |
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| Protein accession | YP_003285989 |
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| Protein GI | 262394135 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02514] type III secretion system needle length determinant |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTA CTCCAACAGA AGAAACACCG AATACGCTGT ACAAATCAAC GCCAGAAAAA
AAGCCCCTGG AGCGAGAGGC TGAGCTTCAG TCACAGTTCG AGCGTGCAAT GACGGAGAAA
CCTCGCAAGG AAGAAGAATC TACCGTTGCG AGCAAAAAAG ACACTCAGAG CAGAGACGAG
AGCCTTCCGT TAAGACATGA AGCATCTCAA AGCATAGACA AACAATCGAA ACTTTCTAAC
CAAGAAACCA GCACTTATAG AAATACCGCT ACATCAAAAG GCAAAAGTGA CGTCGTCACC
AAGAGAGGCG TAGAGAAACC ACAAGACGAC GCAACAAATA GCGAAGAACA CCTAATTGAA
AACAGTAAAT TGCATGAGAA AGATAAGAAA CTTGAGAGCG ATCAGGCTCC AAACTCATCC
TCGATTGAGC GCGTTGGCCC CCATTCTCAA GCACAAGCTT CTCTCGACGG TTCTCTCCCT
AAAAAGGCCG TAGGGAAATC GCTCGCTCAA GATGCAATTA ACCATGCTAA CTTCACGACG
AAACAAACCG AAACGACACA CAATAAGCGT GCAACTCAGC GACTACAAGA CACAGGCAAA
CTAACAGACA AAACCGATAG TCGCTCTGAA ACTAAATCGC TTGAGAAAAT CGAGACGAAA
AGCGCAACAC TGTCCGGTAA AGCGGATGAC GAAAAAGCAG ATCCTCAACA CCTTGCGAGC
GCGGCAACGC AAGGCGATGT CATTTTAAAG AGTGTCGCTT CACAGGCTCA GCCGGCCCCT
GCTCGAGACG TAAACACGTT ACTCCAACAA TTGGTGGACA AAATCTATGT TTCGCTGCCA
ACCGCATCGG ACAACAAAGA GGTTCGGCTG TTTCTGAGTG AAGGACAATT AAAAGGTGGC
GAAATCCACA TCAAGTTGGA CGCGCAAGGT TATAGCGTGA CGATTCGACA AGAGCATGCC
CTTTCCATTA TTAGCCAACA AGCTAGACAA GATCTTGCCG AACGCCTAAA TCGATTTGGC
GGTGATCAGC CACTTCGTCT AGCGATCAGC GAACAAACTC AACAGCTCGA TCAACAACAA
CATGAACAAC AACACTCACG CCAGAAACGT AGCGTGTATG AAGAATGGCA AGCGGAGAAT
GACCTATGA
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| Protein sequence | MRITPTEETP NTLYKSTPEK KPLEREAELQ SQFERAMTEK PRKEEESTVA SKKDTQSRDE
SLPLRHEASQ SIDKQSKLSN QETSTYRNTA TSKGKSDVVT KRGVEKPQDD ATNSEEHLIE
NSKLHEKDKK LESDQAPNSS SIERVGPHSQ AQASLDGSLP KKAVGKSLAQ DAINHANFTT
KQTETTHNKR ATQRLQDTGK LTDKTDSRSE TKSLEKIETK SATLSGKADD EKADPQHLAS
AATQGDVILK SVASQAQPAP ARDVNTLLQQ LVDKIYVSLP TASDNKEVRL FLSEGQLKGG
EIHIKLDAQG YSVTIRQEHA LSIISQQARQ DLAERLNRFG GDQPLRLAIS EQTQQLDQQQ
HEQQHSRQKR SVYEEWQAEN DL
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