| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003361 |
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| Symbol | |
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| ID | 8557094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1919531 |
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| End bp | 1919797 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406456 |
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| Product | type III secretion protein YscS |
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| Protein accession | YP_003285986 |
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| Protein GI | 262394132 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATTCTG CTGAAATCAT TCATTTCACG ACTCAAGCAT TAACCCTAGT TTTGTACTTG
TCGTTACCGC CGATTTTAGT CGCAGCATTG GTTGGTACAT TGGTGTCGCT TATTCAGGCG
TTAACTCAGG TCCAAGAACA AACGTTAGGC TTTGTGGTCA AGCTTATCGC GGTCATTATT
ACGCTGTTCG TCACAACGCA ATGGCTAGGG GCAGAGCTCC ACGCCTTCGC CTCGCTTGCT
ATGGATAAAA TTCCTCAAAT ACGATGA
|
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| Protein sequence | MHSAEIIHFT TQALTLVLYL SLPPILVAAL VGTLVSLIQA LTQVQEQTLG FVVKLIAVII
TLFVTTQWLG AELHAFASLA MDKIPQIR
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