| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003344 |
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| Symbol | |
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| ID | 8557077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1903929 |
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| End bp | 1904672 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406439 |
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| Product | type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ PscJ) |
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| Protein accession | YP_003285969 |
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| Protein GI | 262394115 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.305492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA AAATGAGAGC GGTTTTCATC ATGCTCACGT TGTTTCTGGT GGGTTGTCAG
ACCGAGCTGT ACACCAACGT AACTCAGAAA GAGGGGAATG AGATGTTGTC GATCTTATTA
TCCGAAGGTG TCGTTGCAAC AAAAGAACCT GACAAAGACA ACACCGTCAA GTTAATGGTA
GACAGTTCTC AAATCGCCTT CGCGGTAGAC GCGCTGAAGC GAAAAGGGTA TCCAAGAGAG
CAGTTTTCTA CATTGAAAGA GGTGTTTCCC AAAGACGATT TGATCTCGTC GCCATTAGCA
GAACGAGCAC GTTTGGTGTA CGCGAAATCT CAAGAACTTT CTTCAACCTT ATCTCAGATT
GATGGCGTGC TGGTGGCACG TGTTCATGTT GTTTTGGAAG ATCAAGATCT ACGTCCAGGA
GAGCGTCCAA CTCCTGCGTC TGCCTCTGTG TTTATTAAAC ACGCGGCGGA TATTGCGCTT
GATTCGTATG TTCCTCAGAT TAAATTATTG GTGAACAATA GTATTGAGGG GTTGAATTAC
GATCGAATCA GCGTAGTGAT GGTACCCTCA TCAGAGGTAC GAATTGCTAC TCAAAACAAT
CAATTTAAAA GCATTTTGTC GGTTCAGGTC ACCAAAGAGA CGGCGAATAA TCTTATCGCC
ATTTTGGTGT TCTTGGTAGC TGCGCTTATC GGTTCAAATA TCGCTACTTT TACTTGGTGC
CGCAGGAACA CAAAGCGTGG TTAA
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| Protein sequence | MMNKMRAVFI MLTLFLVGCQ TELYTNVTQK EGNEMLSILL SEGVVATKEP DKDNTVKLMV
DSSQIAFAVD ALKRKGYPRE QFSTLKEVFP KDDLISSPLA ERARLVYAKS QELSSTLSQI
DGVLVARVHV VLEDQDLRPG ERPTPASASV FIKHAADIAL DSYVPQIKLL VNNSIEGLNY
DRISVVMVPS SEVRIATQNN QFKSILSVQV TKETANNLIA ILVFLVAALI GSNIATFTWC
RRNTKRG
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