| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003343 |
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| Symbol | |
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| ID | 8557076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1903582 |
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| End bp | 1903926 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406438 |
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| Product | type III secretion cytoplasmic protein (YscI) |
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| Protein accession | YP_003285968 |
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| Protein GI | 262394114 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02497] type III secretion apparatus protein, YscI/HrpB, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.406466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAACA CGCAGTACAC CGAGGTGATG CAAACCAACA TTGATAAGTT GCAGGATGCA
CAAGTCGAGG ACGGTTTAAG TGAACGTTTC GAACAAGCCA TGTCGGTTCC CGAGGCGAAT
AATGGCTTGG AGGGCGGTTT GCTCGAAAAC ATCAGCGAGT TAAAAAATAC TATCGATAAC
GCGAAAAGTA ACCTGCAAGA CAACATGAAG ATGGTGGGTG ATGATCCGGC GCAATTACTG
CAAATGCAGT GGGCACTGAC GCGCATTACT TTTCAAGAAG AGCTGATCGC GAAAACCGTG
GGTAAAACCA CACAAAACGT AGAAACCTTA TTGAAGGCAC AATAG
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| Protein sequence | MINTQYTEVM QTNIDKLQDA QVEDGLSERF EQAMSVPEAN NGLEGGLLEN ISELKNTIDN
AKSNLQDNMK MVGDDPAQLL QMQWALTRIT FQEELIAKTV GKTTQNVETL LKAQ
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