Gene VEA_003320 details

Gene Information

• Locus tag: VEA_003320
• ID: 8557053
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 1880751
• End bp: 1881437
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 646406415
• Product: transcriptional regulatory protein CitB
• Protein accession: YP_003285945
• Protein GI: 262394091
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4565] Response regulator of citrate/malate metabolism

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATGG CGACTCGCGT AATGATCATT GAAGATGATC TGGCTATTGC TGAGCTGCAC 
CACAAATACT TAAGCCAATT GGCAGGTTTG GAAGTGGTCG GCATTGCGAC CACGAGAATG 
GAAGCGGAAA TGCAACTCGA TATTCTTAAG CCAGACCTCT TGTTGATGGA TGTATACCTT 
CCTGATGGAA CAGGGCTTGA GATACTCAAT ACATTACGTG CGAACAACCA AACGTGTGAT 
GTCATTTTGA TTACCGCGGC AAGGGATGTC GATACGCTAC AACAGGCAAT GAGAGGGGGA 
GTCGTTGATT ACCTACTCAA ACCAGTGATG TTTCCACGCT TAGATGCCGC ACTGAAAAAG 
TATGTGTCCC AACGTCAACA ACTAGACATC GCAGAGAGTT TGGATCAGAA CCTCGTTGAT 
AAAATGCTGC AGTCTCACGC CAATCAAGAC AACTTGCCGA ACCGATTACC GAAAGGGATT 
GATGGTGTAA CCTTGGATAA GATCAGAGAG TTGTTCCCAA ATGGTAGTGT GCTGACCGCT 
GATGAGGCAG GCGAAAAGAT TGGTGCGAGC CGAACAACGG CAAGGCGCTA TTTGGAGTAT 
CTGATCAGCA CTGGTGAACT AGAGGCTGAT TTAAACTATG GGTCGGTAGG TAGGCCGGAA 
AGGTGCTATA AGAAAGTGAT ACGGTAA 

 

Protein sequence

MSMATRVMII EDDLAIAELH HKYLSQLAGL EVVGIATTRM EAEMQLDILK PDLLLMDVYL 
PDGTGLEILN TLRANNQTCD VILITAARDV DTLQQAMRGG VVDYLLKPVM FPRLDAALKK 
YVSQRQQLDI AESLDQNLVD KMLQSHANQD NLPNRLPKGI DGVTLDKIRE LFPNGSVLTA 
DEAGEKIGAS RTTARRYLEY LISTGELEAD LNYGSVGRPE RCYKKVIR