| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003314 |
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| Symbol | |
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| ID | 8557047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1872240 |
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| End bp | 1873304 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406409 |
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| Product | multidrug resistance efflux pump |
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| Protein accession | YP_003285939 |
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| Protein GI | 262394085 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAG CGGAATCATC TTCCAGAAAG TTAAGCTTTA TTATTATTGG CCTCGTTTTT
GTGGTTTGGC TATATAGCTT ATGGGCTGAT CGAGTAACAC CAATCACTGG CACCGCTCGG
ATTCATTCTT ATCTTGTCCG CATTACTCCA GAGGTTTCGG GGAACCTAAC TGAAATCCAT
GTTCGTAATA ATCAAGTCGT CAATGCTGGT GATGTGCTTT TCGAAATTGA TCCAAGAGAT
TATCAAATTA ATCTGCGTTC AGCCGAAGCA AACTTAGCCA TTGCTGGCCA AAACATTGGA
GCCAACACCG CGGCTGTTGA AGTGGCACAA GCTAAGGTCA TTGAATCACT CGCAGCTCGT
GACAACGCAA AAGAACAAGC AGCTCGCGTA ACCGAGCTCG CCGCAAAAGG GGTATTGAGT
AAATCTGAGC TAGACAACGC CATCGAAGCT AAAGCACGAG CTCAAGCCAC ATTAGAGGCA
GCAGAAGCGT CCTTAGCTCA AGCCAAGCAT AATCTTGGCC CCGAAGGGCA AGATAATCCC
CAGATTCTCG CAGCTATAGC AAATCTAGAA AAAGCGCAAC TCGACTTACA ACGAACGAAA
GTGATTGCTC CATCAAAGGG GATCGTTTCT AACTTACAAC TCACTGTTGG GCAAAAAGCG
ACGACTGGCT CACCTCTTGT CACTTTCATT GATCCGAGAG GCGTGTGGGT ATCAGCGCTT
GTTCGCGAAA ACTCACTCGA GCATGTTCGT GCGGGACAAA AAACAAAGAT TGTGTTGGAT
GCTTTACCTG GCAGAGTGTT TCAAGGGCGA GTAGAAAGCA TTGGTTGGGG CACTGGTGGC
AGTAACGACG TCGATCCGAC AACTGGCTTT TTGGTTGCAG ACAATAATTC CTTAAACGCA
CAGCGCTATC CTGTAAATAT TGTTTTTGAA GGCGGAGATA TTCCCGAAAA CGTACGTTAT
GGTTCGAAAG CAACGGTCGC CTTTTTAACT GAGCAAAGTA CCTTTGGAGA GTGTCTGGCG
TCTCTCTGGA TGAGAGTGTT GAGTATCTGG ACTTATGTTT CATAG
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| Protein sequence | MSKAESSSRK LSFIIIGLVF VVWLYSLWAD RVTPITGTAR IHSYLVRITP EVSGNLTEIH
VRNNQVVNAG DVLFEIDPRD YQINLRSAEA NLAIAGQNIG ANTAAVEVAQ AKVIESLAAR
DNAKEQAARV TELAAKGVLS KSELDNAIEA KARAQATLEA AEASLAQAKH NLGPEGQDNP
QILAAIANLE KAQLDLQRTK VIAPSKGIVS NLQLTVGQKA TTGSPLVTFI DPRGVWVSAL
VRENSLEHVR AGQKTKIVLD ALPGRVFQGR VESIGWGTGG SNDVDPTTGF LVADNNSLNA
QRYPVNIVFE GGDIPENVRY GSKATVAFLT EQSTFGECLA SLWMRVLSIW TYVS
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