| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003297 |
|---|
| Symbol | |
|---|
| ID | 8557030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1858724 |
|---|
| End bp | 1859245 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 646406392 |
|---|
| Product | probable acetyltransferase |
|---|
| Protein accession | YP_003285922 |
|---|
| Protein GI | 262394068 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTT ACCCAGAAAT CGAGTTATCT AAAGCGCAGC ATAATGCAAT TGAGGCTCTG
AGAAACAAGT CGTTTCCTGA ACATCAGGTT GCTCGTTCTT ACTATAAGCA ACTCCCGCAT
ATGAGAGTTC TGAAGTACGA AGGTGACCAG TTAGTTGGTT ATATGGGATT AGACTACAGA
GCTGTTCGCG TTGGTGATGA AATTTATAAA GTATTAGGTG TGAGTGACTT TTGTGTCGAG
AGCACACTTC AAAGGCAAGG TATTGGCACA ACAATGTTGT CTCAACTCAG CGAGTATGCG
TCAACTAAAG ATGTCGACTT CATCATTTTA GTCTCCGATT TGGATCGTTT TTATGTGGCT
AATGGTTATG TGCGCCTTAA CTCTCTAAGT TCTTGGTTGC GAGTTCATGA ACATAAAAAT
TACGGTGTTG CTATAGAGCA AGTCGATGAT TTATATGTTA AACCTATCAG CGGCAAAATT
TGGGCTGTTG GTCATATAGA TTGGTTAGGG TATATGTACT AG
|
|---|
| Protein sequence | MDIYPEIELS KAQHNAIEAL RNKSFPEHQV ARSYYKQLPH MRVLKYEGDQ LVGYMGLDYR
AVRVGDEIYK VLGVSDFCVE STLQRQGIGT TMLSQLSEYA STKDVDFIIL VSDLDRFYVA
NGYVRLNSLS SWLRVHEHKN YGVAIEQVDD LYVKPISGKI WAVGHIDWLG YMY
|
|---|
| |