| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003284 |
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| Symbol | |
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| ID | 8557017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1843625 |
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| End bp | 1844830 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406379 |
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| Product | integrase |
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| Protein accession | YP_003285909 |
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| Protein GI | 262394055 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATCA AGCAAAAGAT TACCAATACC TCAATCAAGA GTTTTAAGGT CGATGACAAG
CGTTTGAACG ACACTGAGAT CAGCGGTTTT CACGCTCGTA TCTCCCCCAA AGGCATCATC
AAATACTACT TTTACTATCG CCTGAATGGG AAGCAGAGAA ACTACCTCTT AGGTGCAGCA
ACTTCTTTAA CGCCTGCTCA AGCCCGAGAT TTAGCAAAAG AAAAAGCAGG TCTTGTCGCA
GGTGGACAAG ATGTTCAGGA AACGCGTTTT GAAGCCAAAC GTGAAGCGTT AAGAAAGACA
CTGACCCTAG AACGATTTCT TGATGAACAT TACGAGAGTT ACTTACAGGC TCTAAACCCT
AAAACAGCCA AACAATCCTT TATGTGCATA AAAAGCAGCT TCAAGCATTT AGCTCATAAA
CCCATGTCTG AAATTACGGC TTGGGACGTT CAACAATGGG TGTCTGAAAA GCGCAAGTTG
GGTAGGGCAT CATCAACCAT TTCATACGCC TACAATCGCT TGAAAGCCGC GTTTAACCGA
GCTGTTGAAT GGGACTTCAT TGATTCTCAT ACGCTCAGTA GTGTGAAGAT AGTCAAAGAA
GATGATCAGC GTATTCGTTA TCTGTCTACG GCAGAAGAAA CAGCGTTATT AGACTCCTTG
AAAGTGCGTG ACATTCGCCT GAGGGAAAAT CAGAAGCAAG CCCATCGTCA GGAAGTGCCC
AAGCTGCGGT ATGCGGATTA TTTAGAGCCT TTAATCGTGA TGGCGATTAA TACGGGCATG
CGAAAGGGTG AAATGCTGTC ATTATGTTGG GAGCACATTA ACTTCGAAAA TCGTTATCTC
ACCATTACCT CAGCAAATGC GAAGTCTAAG AAACGCCGAA CCATTCCTTT AAACGATACC
GTTTTCTCCA TGCTGAACGA TTGGAAGGCT CAGAACTATA GTGAGGAAAG TGGGCTCGTG
TTTACCTCAA ATGGAAAGCC GATTGATACC TACCAATATC AATGGGAGCA ATTACTGAAA
GACGCCAATA TTCAGAACTT CCGTTTTCAC GACTTATGCC ATCACTTCGC CAGCAAGCTT
GTCATGGCAG CGGTGGATTT GAATACCGTT CGGGAGCTTC TTGGTCATGC CGATTTAAAG
ATGACGTTGC GCTATGCCCA CTTAGCACCA GAACACAAAG CATCGGCGGT GAACCTGATT
GGTTAG
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| Protein sequence | MAIKQKITNT SIKSFKVDDK RLNDTEISGF HARISPKGII KYYFYYRLNG KQRNYLLGAA
TSLTPAQARD LAKEKAGLVA GGQDVQETRF EAKREALRKT LTLERFLDEH YESYLQALNP
KTAKQSFMCI KSSFKHLAHK PMSEITAWDV QQWVSEKRKL GRASSTISYA YNRLKAAFNR
AVEWDFIDSH TLSSVKIVKE DDQRIRYLST AEETALLDSL KVRDIRLREN QKQAHRQEVP
KLRYADYLEP LIVMAINTGM RKGEMLSLCW EHINFENRYL TITSANAKSK KRRTIPLNDT
VFSMLNDWKA QNYSEESGLV FTSNGKPIDT YQYQWEQLLK DANIQNFRFH DLCHHFASKL
VMAAVDLNTV RELLGHADLK MTLRYAHLAP EHKASAVNLI G
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