| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003242 |
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| Symbol | |
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| ID | 8556975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1807548 |
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| End bp | 1810997 |
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| Gene Length | 3450 bp |
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| Protein Length | 1149 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646406337 |
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| Product | helicase putative |
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| Protein accession | YP_003285867 |
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| Protein GI | 262394013 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.919418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGTTAA CCTCTTTAAT CAGTAAGTTC TTTTCTGGTC TAGATAAGAC GTCTCAATTT
GAGTTAGTCT GTGATGATAG TCTTGATTTC ACAACCTCCA AGAAAACCCT AGAGAAAATT
AAAGCTGGTA AAGCTGATGA GTGGATAACG GCGCAGTATG TTGCACTTAG AATGCTTGAA
GAACAGGGGG ATGTAAGCTC ATTTCCAGAT GGCTTTATTA TGCCTGCCGA TACAGCGGTA
AGGCTCGACT CTGATTTGAG AATCTTGTTT GGTTTTCCTT CGGTTTGGCA AGGAACTATT
GATGCAGATA TTCAAGGAAA AGCTAGCACA CCTACCTTTA AAGTTGACCT TTCGGTAACA
ACCAAACAGG GTCGAACAAC GCTAAATTAC ACTGTGGATG GACCTTTCAT TCGGTTTAGT
CAAAATGAGC AGTACCTGTT AACGCCCGAG CAGTTTATGG CCTTTAACGC ACATAAAGCC
CATGGAAATT CTGCTCGGTC TGAATACGAT AACTTACTTT ACCTACACTC TTTACAAGAG
GCTCAACAGA GTGGTTGTAA GTTGAATCTA AAGCACTTTG AAAAGCTAAG AATTCTGACA
CCAAATAAAA TTACAGTAGA AGCAGAACTG AATTCTCAAG GCGAGCTGAT ATTGACGCCA
AACATGGGGC AAAGTGCGAG CCATGAGTCG ATTCAAAAGG TTTTGGGGCA GTTGCAAAGC
GACAACGCAG TTACTCTGAA AGTGGGTGAT GAAATAGTCT TGTTTTCTGA AGAAAAGCTA
ATGGCTGTAA AAGAAGTTAT TAGCAACAGG GTAATTCCCC AACAGCAAGT TAAAGCGTTC
TTGGAAAACC CTACAGCCTA TATTGATGCG AGCTTAGTCG ATCTTGATTT AGGTTTTTCT
ATCAGAGTTC ATGGTGCGAC AGTTTTTAAA CACGCTTATT TTGGAGAAAC GGACGAGTCA
GGCATAGATT GGTTCGGAGC CTCCTCTTCA TCTGATGTGA TTAATCCAAT ATCTAAGCTG
GCTGATAGAA TTCGCGATAA AACAACTCTT GAGGACGTAA CTAAGAAGAT TGAAGATGCT
CAACAAACCG GAGCAACGGT TTTAGATTAT GAAGGAAAAT CATACGATAT CAGTGAGCCT
GTAGCTGTCG AGAAAGTTCT AAAAGAAATA GGTCACAAGA TATCTAACCC TGATACAGAT
CTTTCTAGCC ACGGAGAGGA AGAAGACGCC GAGACTGAAT CAGAAAGCGC AGAAATACAT
GTTGTCGATA TTGATCTAAA TGATGAAGAG TTGTCTGAAA ATTCTCCTAA AGTTGAACAA
CTGATTTCTG ATATTTCCTG GGATGGTGAG TTAAATTGGG AAAACCACAA GCGGACACCT
TTTCCACATC AGGATATTGG TGTTCGTTGG ATTTTAGGCG TTGAGCAAAA AACCTTATCA
GACTCGAAAA TTAGTGGAGC TTTGCTTGCT GATGACATGG GGTTAGGTAA GACTTTTATG
GCCCTCTCTG CGATCGAACA TATTTATCAA CGACAGAAAA TTAGTGGTGA AACGAAGAAA
CCTGCGCTGA TAGTCGCTCC TTTGAGTTTA TTGGAAAACT GGAAGGATGA GGTAGATAAA
ACCTTTAAAC ACTCACCATT CAAAGATGTG GTTATTTTGC AATCAGCCGC TGAGTTAAAT
GACTATCGCA TGGGTGGCGT GGAGATTCGA AGCCAGAGCA CATCTGATGA TTGTTTAGAA
CCCAAGTATT CTTTGAAAGT AGGGAAACAC TTTGGTCCAG GCCGTTTAGA TCTACCAGAG
CGATTGGTTA TCACTACTTA TCAAACCTTG CGCGATTACC AGTTCTCCAT GTGTTTGATT
GATTGGGGGA TTGTGGTTTT CGATGAAGCC CAGAATGTTA AAAACCCAAA TGCACTTCAA
ACTCGTGCAG CGAAGGGTCT AAAAGCTGAT TTCAAACTAG TGGCTACGGG GACGCCTGTA
GAAAACAGCT TAGCCGATTT TTGGTGTTTA ATGGATACAG CTTGCCCAGG CCATCTGGGT
AGCTATCAAG AGTTTCGTGC TCGGTATATC TCACCAATTC TTAAAGCTGC CGGTGATGAA
GTTGAAGAAA TAAGAGCTAG GCTTGGAAGA GAACTTCGCA TAGCGGTCGG GGCATTGATG
TTGAGACGCG TTAAAGAGGA CAACCTTAAA GGGTTACCTA TAAAACATAT GTATGCTGGC
GGAGATTTTG AAAACTGGAA GTACTTAGAA GAACTTAAGT CGATAATGGT TGGCTACCAG
AGAGATGTTT ACGAAGGGAC TATTAGTAAT CAACTCGAGA ATAAAGAGAG CCACGCACTT
ACCACTTTGA TGAGGCTAAG AGATAGTTCG TTACATCCTA GGTTAAGTGA TGGAGGTCGC
CTTGATATTC CAAAAAATGC AAAATCAGCT AGGGCTTTAT ACGGAGAATC AGGAAAAATA
GTTTCCTTAC TTGAGACTTT AGATCGAGTA CGAAGTAAAC ATGAAAAGTG CATTATTTTT
GCGGTTAACA AACGACTGCA AAGCTTCTTA AGCGTGACTT TGGGACAGAT CTATAACTTA
GGTCCGCTTT CAGTAATTAA TGGTGATGCG AAAGCCGTAG CAAAGCGTAA ATCTGCCCCA
ACTCGAAAAT CAATGATTTC AGACTTTGAA GCAAAAGAAG GCTTTAATTT AATTGTAATG
TCTCCAGTCG CGGCTGGTGT CGGTTTAACT GTGGTCGGTG CGAATCATGT GGTTCATTTA
GAGCGGCACT GGAACCCGGC TAAAGAAGCT CAAGCGACGG ATAGGGTTTA TCGTATCGGG
CAAGAAAAAG ATGTACATAT CTATATCCCG CTTTTACATC ATCCCGAATT TGAATCGTTT
GACGTAAATC TACATAGGCT ACTTACCCAA AAAACGTTGC TGAAGGATGC TGTTGTTACA
CCAGAAGATG TGGTTCCACA GCCAGCAGGT GTTGGGGGAG TAGTTTCTGG TGATTTGATT
GATAAACGTA TTACAGCGGC AGAACTTGAT AAGTTAAGTT GGCAGCAATT TGAAGCGTTA
TGTGTAGAAT TGCTGGCAAA GATTACGGAT AGTGAAAGTG CGTGGCTTAC GAATAGTGGT
GCTGATCATG GTGCTGACGG TGTGTTACTC AGTAATCGTG GCAACATTCT AGTGCAAGCT
AAGTTTACGC AACGACAATA TGATGGCTAT AAAGGAATTC AGGAGATTCA CTCTGCGAAA
CCTATTTATG AAGCAGCAAT GAGAAGTTCT TTTGAGCGTT TGATTTTTGT TACCAATTCA
CCTTCGTTAG CTAAGCGAAC TCATGAAATT GCTGCCACAT GTGGTGTTGA AATTTTGGGC
AGAACACAAT TGTTGACTTA CCTTGAAGAA TATGAAATTA CTCTGAAAGA AATATTATCG
AGACTGGGCA AAGAAAGACT GAAAGTTTAG
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| Protein sequence | MELTSLISKF FSGLDKTSQF ELVCDDSLDF TTSKKTLEKI KAGKADEWIT AQYVALRMLE
EQGDVSSFPD GFIMPADTAV RLDSDLRILF GFPSVWQGTI DADIQGKAST PTFKVDLSVT
TKQGRTTLNY TVDGPFIRFS QNEQYLLTPE QFMAFNAHKA HGNSARSEYD NLLYLHSLQE
AQQSGCKLNL KHFEKLRILT PNKITVEAEL NSQGELILTP NMGQSASHES IQKVLGQLQS
DNAVTLKVGD EIVLFSEEKL MAVKEVISNR VIPQQQVKAF LENPTAYIDA SLVDLDLGFS
IRVHGATVFK HAYFGETDES GIDWFGASSS SDVINPISKL ADRIRDKTTL EDVTKKIEDA
QQTGATVLDY EGKSYDISEP VAVEKVLKEI GHKISNPDTD LSSHGEEEDA ETESESAEIH
VVDIDLNDEE LSENSPKVEQ LISDISWDGE LNWENHKRTP FPHQDIGVRW ILGVEQKTLS
DSKISGALLA DDMGLGKTFM ALSAIEHIYQ RQKISGETKK PALIVAPLSL LENWKDEVDK
TFKHSPFKDV VILQSAAELN DYRMGGVEIR SQSTSDDCLE PKYSLKVGKH FGPGRLDLPE
RLVITTYQTL RDYQFSMCLI DWGIVVFDEA QNVKNPNALQ TRAAKGLKAD FKLVATGTPV
ENSLADFWCL MDTACPGHLG SYQEFRARYI SPILKAAGDE VEEIRARLGR ELRIAVGALM
LRRVKEDNLK GLPIKHMYAG GDFENWKYLE ELKSIMVGYQ RDVYEGTISN QLENKESHAL
TTLMRLRDSS LHPRLSDGGR LDIPKNAKSA RALYGESGKI VSLLETLDRV RSKHEKCIIF
AVNKRLQSFL SVTLGQIYNL GPLSVINGDA KAVAKRKSAP TRKSMISDFE AKEGFNLIVM
SPVAAGVGLT VVGANHVVHL ERHWNPAKEA QATDRVYRIG QEKDVHIYIP LLHHPEFESF
DVNLHRLLTQ KTLLKDAVVT PEDVVPQPAG VGGVVSGDLI DKRITAAELD KLSWQQFEAL
CVELLAKITD SESAWLTNSG ADHGADGVLL SNRGNILVQA KFTQRQYDGY KGIQEIHSAK
PIYEAAMRSS FERLIFVTNS PSLAKRTHEI AATCGVEILG RTQLLTYLEE YEITLKEILS
RLGKERLKV
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