Gene VEA_003237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003237 
Symbol 
ID8556970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1798094 
End bp1800088 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content41% 
IMG OID646406332 
Producthypothetical protein 
Protein accessionYP_003285862 
Protein GI262394008 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGATA ATTTATCAGT CAAAACTGAG CTGCTGACGC TTGAAAAAAT TTATACAGAG 
AACTATCAAT TTTCTATCCC TAGTTATCAG CGTCCTTATG TCTGGTCAGA TGATGACGTC
TTACTGCTGT TCAGAGATAT TAAAGAAGCT TGCCGCTTGA AGGAGCCAAA TTACTTTATT
GGCACAATTC TATCGTCTCG TATTGAGCAA GATGGGGAAC GTATTTATGA GCTTATAGAT
GGTCAGCAGA GAACGACTAC TTTAATGTTG ATGACGATTG CCTTTAAGTA TGCAGGCATC
AAATCTGACC TAGCTGGGCT AGCTGTTTAC CATTCGAGCG AGGGTGAAGA TAAACCGCGT
CTTCAGTTCG CTATTCGAGA TCAAGTTCAG CAGCTTTTAG GTGGTTTAGC AGGGCTTAAA
AATTATCAAA CTCCCTCTAA GGAATCGATT ACTGATAATG CTTATCTAAA ACAGATGGGC
GTTGCGCTAG ATGTATTGAC GAAAGAAGTG AAAAAACTTA ACTCTGACGA TGAAGTGAGT
GCCGAAGACC TGGGTGATTA CCTCTACCGC CAAGTTCAAT GGGTGAACAA CATTGTGCCA
ACAGAAATGG ATTTAAACCG GTTGTTTGCC ACCATGAACA CCGCTGGTAT CCAACTAGAG
CAGGCGGATA TTTTAAAGGC TAAGCTGTTT AAGCAGATTC ACACTGACAA AGCACAGTAT
GATGCGATGT GGGTGGCATG TGAGCACTTA GAAAATTATT TTGAACGCAA TGTTCGTAAA
GTTTTCCCTA ACGCCGATTG GTATAGCATT GAGCCTGAAC ATTTGGCGTC TTTTGATCCA
GAACGTTTCT GTTCGGCACA TGAAGACAAA GATAATAAGG AATCATCAGG GTTTTCGATT
GCTCAACTTG CTAAGCAGTT AAAACAGGAA TCAACACCTG AAAACACTGA ACAGGACAAA
TTTGAAACAT ACGACCTAGA TGTTGAGACC GTTTACTGCC GCCCAATAAT CAAGTTCCCA
CAGTTACTCA TTCATGCTTA CCGTGTTTAC CTTGCACTTA ATGGAGGTCA AGATATTGAG
CCACGCCTTC ATAGTGATCG CTTATTGGAG ATATTTGAAC CACTTATCAA TGGTGATGAG
CAATCGGTAA AGCTGTTTAT CGAAACGCTA TGGCAGGTTC GCTACCAGTT CGACCGTTTG
GTTGTAAAAT GGGTAGAACG TGATGATGCA ACAGATGTGC AGTTGGCGTT AACTCGTCAG
TACCTAAGCG AATCAAAGGG TAAGCGGTAT ATTAACCGTG AGCCGAAAAA TATAGGTGAG
CTGGTTCTCC TACAAAGTGT TCGTAACTTT ACCGGAGAGC GCAGCGCCCA GTATTGGTTA
ACGCCGTTTA TCACTGGTTT GATCCGTTCG AACGTCATGC AAGATACCGA GGCACTAGAG
CTACTGGAAA GTATCGATAA CAAAATGTCA CTGTCTATTG ATACACAGAA AGAGGCGAGC
TTTGCTTTAG CTAGCGGGTT ACAACCCAAT TGCCAGAGTT GGCAATCTCA ATCGACGTAT
TTTGAACAGT CGCTAGGTAC TAGTTTTGAG CATTACTGGT TTCAAAAGCT TGAATATTTG
ATTTGGAAGC AGATGAAGTC GTCAGAATCC TCGTTGTCTG CTGAAGAATT GAATAAGTTC
AAAAAGTACC GAATTACATC CAAAAACTCT GTAGAACATG TTCATCCTCA AAATGATGAG
TATAAGAGTG AGTTAGCATA TGAAACTTTA AACTCATTTG GTAATTTAGT ACTACTTAGT
CCCGGTGAAA ATTCTTCTTA TAGTAATCAA GATGTAGACA AAAAACGCAT CGATTTCGAT
AGGAAGTCCC ATTTCGATGC ACTGAAACTA AGAAAAATAT TTAATGTGAA AGGACAGGGT
ACTTGGGGTA AACAGCAGAT TGAACAACAT CTAGATGAGA TGATGGCAGT TTTTGCTCAG
CACTATCAAC ATTAG
 
Protein sequence
MGDNLSVKTE LLTLEKIYTE NYQFSIPSYQ RPYVWSDDDV LLLFRDIKEA CRLKEPNYFI 
GTILSSRIEQ DGERIYELID GQQRTTTLML MTIAFKYAGI KSDLAGLAVY HSSEGEDKPR
LQFAIRDQVQ QLLGGLAGLK NYQTPSKESI TDNAYLKQMG VALDVLTKEV KKLNSDDEVS
AEDLGDYLYR QVQWVNNIVP TEMDLNRLFA TMNTAGIQLE QADILKAKLF KQIHTDKAQY
DAMWVACEHL ENYFERNVRK VFPNADWYSI EPEHLASFDP ERFCSAHEDK DNKESSGFSI
AQLAKQLKQE STPENTEQDK FETYDLDVET VYCRPIIKFP QLLIHAYRVY LALNGGQDIE
PRLHSDRLLE IFEPLINGDE QSVKLFIETL WQVRYQFDRL VVKWVERDDA TDVQLALTRQ
YLSESKGKRY INREPKNIGE LVLLQSVRNF TGERSAQYWL TPFITGLIRS NVMQDTEALE
LLESIDNKMS LSIDTQKEAS FALASGLQPN CQSWQSQSTY FEQSLGTSFE HYWFQKLEYL
IWKQMKSSES SLSAEELNKF KKYRITSKNS VEHVHPQNDE YKSELAYETL NSFGNLVLLS
PGENSSYSNQ DVDKKRIDFD RKSHFDALKL RKIFNVKGQG TWGKQQIEQH LDEMMAVFAQ
HYQH