Gene VEA_003236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003236 
Symbol 
ID8556969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1796689 
End bp1798104 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content44% 
IMG OID646406331 
Producthypothetical protein 
Protein accessionYP_003285861 
Protein GI262394007 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAG TTGTTTCCAG TTGCACCTTA GAACAGCTCT TTTCTGGTGT GCCAATTCTA 
GCCTCTGACG GTAAGGTTCA AAAAGACATT CACGGGATGC TCACCATCCC TGAATATCAG
CGTCCATATC GTTGGAATGA AGAGCAAATT ACTCGTTTGT TGAATGACTT CAAGGTTCAC
CAGCAAGAGT TAGTCGGTAA GCCTGAAGCA GAGCACTGCC CATTTTATCT GGGTAGTGTC
ATCCTCCACC AGCAAGGCGA TAAGCTTAAC ATCATTGATG GTCAGCAACG CCTGACAACG
ATGGCTTTAA TCTCTTATCT AGCGGATAAA CATGCTGACC TAAAACTGGT TTATGAATCA
CCAGAGAGCC AGCAGCAGAT TAAACATAAT CTTGGTTGGC TTTTAGCTCA AAATTCGAGA
TTGGAAAACA TCGACTTTGC TCAAATCAAC ATCACGCTGG TGGTGACGAA TAGCGAAGAT
GAAGCCTACC GCTTTTTTGA AACCCAGAAT ACAGGTGGGG TACGGTTAGC GGGACCAGAT
ATTATCAAAG CCCACCATCT GCGTGCAGTG AATGAAAAAG ACAAGTCTGC AGTAAACACC
TTTGCAACCC GTTGGGAAGC GCTGGGGGAT TTGAGCCCAG TCGTGGATAT TTTGTTACGT
GGTCGCTATT GGCAATACCT TAACTTTCGT AATTACCCGC TGCATAACCA AATTCAGCAA
GTACGTAATA GCATTGTCGC TGAGCTGGCA GAAGAGACAG GCAAAGGCGA TGACATCGCT
TTTGGCAGAA TAGCGCGTAC CTATATGTCA AATGGTGGTG AGAGTGTATC TCAACCTCAA
GTTGGCTATG AGTTGCGTCA GCCTCTAAAT AGTGGCGAGA ACACGATTCA CTACTTGCAA
TATTTCGAGC AACTGCGCCA AACCTATTTG CTGAATCAAA CAACTCAAGG CGAATTAGCG
GGCTTTTACG ATTTCTATAA AAAATTAGTG TGTAAGCTTG ATGGCTGCGG TTATCTTAAA
CAGCTCTACG ATGCTTGCCT GTTGCTTTAC ATCAGCCAGC ATGGGCAGCA AAGCCTAGAA
GTGGCTGCGA AAAAGCTATT TCGCGTGGTT TATTCTCGCC GAGTCGAAAA CCAAACGGCA
GTAAAAGAGA GATCTGTTCC TGCATTTGTC AAAGAAACGC CTGTGTTGGA TTGGATTGCG
ATGAGCTATA CCCCAGAGCA ATGTTTTGCT CTGTTAGACG GCTTTAAGCT GTCAGTAGAT
AAGAGCGGCT TTGATAAAAA CAGTGTTAAA AAACGCTTCG TAAAACGCGT AACTCAATAC
TTTAAGCTTG AAATCGATGA GCAAGACTAT GCGAACCAAT TTGGTCTTTC ATTTAGCCAA
CATATCTCTG CGTTAGGAGT GCAACATGGG CGATAA
 
Protein sequence
MAVVVSSCTL EQLFSGVPIL ASDGKVQKDI HGMLTIPEYQ RPYRWNEEQI TRLLNDFKVH 
QQELVGKPEA EHCPFYLGSV ILHQQGDKLN IIDGQQRLTT MALISYLADK HADLKLVYES
PESQQQIKHN LGWLLAQNSR LENIDFAQIN ITLVVTNSED EAYRFFETQN TGGVRLAGPD
IIKAHHLRAV NEKDKSAVNT FATRWEALGD LSPVVDILLR GRYWQYLNFR NYPLHNQIQQ
VRNSIVAELA EETGKGDDIA FGRIARTYMS NGGESVSQPQ VGYELRQPLN SGENTIHYLQ
YFEQLRQTYL LNQTTQGELA GFYDFYKKLV CKLDGCGYLK QLYDACLLLY ISQHGQQSLE
VAAKKLFRVV YSRRVENQTA VKERSVPAFV KETPVLDWIA MSYTPEQCFA LLDGFKLSVD
KSGFDKNSVK KRFVKRVTQY FKLEIDEQDY ANQFGLSFSQ HISALGVQHG R