Gene VEA_003164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003164 
Symbol 
ID8556897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1739738 
End bp1740778 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content49% 
IMG OID646406259 
ProductDUF697 domain-containing protein 
Protein accessionYP_003285789 
Protein GI262393935 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGT TGAAGCAAAA ACAAGTTTTC TCTGAAAAGG CAATGGAAAA AGAGCAGCAA 
TCGAATCAAC CGGAGTTGAC GGCGCAGCAA ACATTCGGCG AAAAAGAAAC ATTCGTACCT
GTTGAACTTA AAGAAGAGCG CCAGGAGACC GAACAGGAAT TGCAACTCGA GCATGTCATT
CGTCCAAAAC CGGGCAGAAA ATGGCTTGCG ACTGGCGCAT TTGCCACCTT TGCTGGTTTG
GTTGGCTGGC AAGCGGTGGA CTCGGTTATA ACCGCAATTC AAACTTCTGA TTGGCTGGCT
TTAAGCTGGA CGGGGTTTAT TGCTGCGATC GCTTCGCTTG GTTTAGGGGC GATGGGTAAA
GAGCTTTGGA AACTGCGCAA ACTACGAAAT CATTTTAGTG TTCAAGAAGA AGCCGAAGCA
CTTGTTAATA GTGAGAGTGT GGGGAAAGGG AAAGCCTTTT GCGAAACAGT GGCAGAACAA
AGTGGTGTGA TGGCAGAGAA CCCGGGCTTT GATCGTTGGC AGAACAGCAT TAACCCTGCT
CATAGTGATG CTGAAATCCT TGATATGTAT GACTCGATGG TTGTGAGCCA ACAAGACAAA
TTGGCAACGA AAGTCGTATC GCAGCACGCA ACCGAGTGTG CGGCCCTAGT CGCGGTGAGC
CCTCTGGCTG CCGCTGATAT GTTGCTGGTG GCGTGGCGAA ATTTCAAAAT GATCGACAAC
CTCTCCAAGG TATATGGGGT AGAGCTAGGT TATGCCTCTC GCATCAAGCT ACTAAAAGCG
GTATTTGTCA ATATGGCGGC GGCTGGTGCC AGTGAGCTAG CTATTGATGC CAGTATGGAC
TTGATGTCGA TGGACCTTGC AGGCAAAGTC TCCGCTCGTG CGGGGCAGGG GCTAGGCGTT
GGTATTCTCA CTGCACGTTT GGGCTTGAAA GCGATGACCT TATTGCGTCC ACTACCTTGG
TATCCTGACC GTCAGGTTAA ATTGGGCACC ATACGCAAGG CTGTGGCGGC GAAAGTTGCA
TCAATTACGA TTAAACCGTA A
 
Protein sequence
MSELKQKQVF SEKAMEKEQQ SNQPELTAQQ TFGEKETFVP VELKEERQET EQELQLEHVI 
RPKPGRKWLA TGAFATFAGL VGWQAVDSVI TAIQTSDWLA LSWTGFIAAI ASLGLGAMGK
ELWKLRKLRN HFSVQEEAEA LVNSESVGKG KAFCETVAEQ SGVMAENPGF DRWQNSINPA
HSDAEILDMY DSMVVSQQDK LATKVVSQHA TECAALVAVS PLAAADMLLV AWRNFKMIDN
LSKVYGVELG YASRIKLLKA VFVNMAAAGA SELAIDASMD LMSMDLAGKV SARAGQGLGV
GILTARLGLK AMTLLRPLPW YPDRQVKLGT IRKAVAAKVA SITIKP