| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003155 |
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| Symbol | |
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| ID | 8556888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1728070 |
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| End bp | 1729431 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406250 |
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| Product | L-serine dehydratase |
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| Protein accession | YP_003285780 |
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| Protein GI | 262393926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.225865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGTG TTTTTGATAT CTATAAAATC GGTGTTGGAC CTTCAAGCTC ACACACTGTA
GGCCCAATGA AAGCGGGTAA AGAGTTTATT GATGATCTTC GTGCAATGGG AAAACTGCGC
GACATCACTA AAATCACCGT TGACGTTTAT GGATCACTAT CACTGACAGG GAAAGGTCAC
CACACAGATA TTGCTATCAT CATGGGTCTT GCAGGCAACA CTCCTGAGAA AGTTGATATC
GATTCTATCC CGGGCTTTAT CGCTCGCGTA GAAGAAACTG AACGCCTTCC TGTTGGCATG
CACTGTCACA CAGTATCGTT CCCACGTGAA GGTGGAATGA ACTTCCACAA AACAAACCTT
GAGTTACACG AAAACGGCAT GCAAATCCAC GCTTGGATTG ATGACGAAAA AGCGTACTCA
AAAACTTACT ACTCCATCGG CGGTGGTTTC ATCGTTGATG AAGAAAACTT CGGTAAAGAA
GTTGAGAATC CAGTAAAAGT TCCTTACCCG TTTACAACGG CAGAAGAGCT TGTAAAGCAA
TGTCATGAAA GCGGCCTGTC TATCAGTGCG CTAACCATGA AAAATGAACA TGCGCTTCAT
TCTGACGAAG AAACTCGTAC TTACTTCGCA AACATCTGGC GCACAATGCG CGAATGTATG
GATCGCGGTA TGAACGAAGA AGGCATTCTG CCTGGTCCAC TACGCGTGCC TCGTCGTGCG
GCAGCACTTC GTCAGCAACT GCTTACTTCT GAAAAAACAA CGAACGATCC AATGTCTGTT
GTTGACTGGG TAAACATGTT TGCTTTTGCA GTAAACGAAG AGAACGCAGC AGGTGGTCGT
GTTGTAACTG CGCCGACTAA CGGTGCATGT GGCATCATCC CTGCGGTACT GGCTTACTAT
GACAAGTTTA TTCAAACCGT AACTGAGAAA GACTACATCC GTTACTTCGC AGCTTCTGGT
GCAATTGGCG GCCTTTACAA GCGTAACGCG TCTATCTCTG GTGCAGAAGT TGGCTGTCAG
GGCGAAGTTG GCGTGGCATG TTCTATGGCA GCAGCGGGCC TTGCTGAGCT TATGGGTGGT
AGCCCAGAGC AAGTATGTAT GGCGGCTGAA ATTGCGATGG AGCACAACCT AGGTCTAACT
TGCGACCCGG TTGCAGGTCA GGTTCAGGTT CCATGTATCG AGCGTAATGG TATTGCAGCT
GTAAAAGCAA TCAACTCAAC TCGTATGGCA CTGCGTCGTT CTTCTGCTCC TACTGTTTCT
CTAGATAAAG TTATCGAAAC AATGCTAGAG ACAGGTAAAG ACATGAACGC GAAATACCGT
GAGACTTCTC AAGGCGGCCT AGCAGTAAAA GTTATCTGTT AA
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| Protein sequence | MISVFDIYKI GVGPSSSHTV GPMKAGKEFI DDLRAMGKLR DITKITVDVY GSLSLTGKGH
HTDIAIIMGL AGNTPEKVDI DSIPGFIARV EETERLPVGM HCHTVSFPRE GGMNFHKTNL
ELHENGMQIH AWIDDEKAYS KTYYSIGGGF IVDEENFGKE VENPVKVPYP FTTAEELVKQ
CHESGLSISA LTMKNEHALH SDEETRTYFA NIWRTMRECM DRGMNEEGIL PGPLRVPRRA
AALRQQLLTS EKTTNDPMSV VDWVNMFAFA VNEENAAGGR VVTAPTNGAC GIIPAVLAYY
DKFIQTVTEK DYIRYFAASG AIGGLYKRNA SISGAEVGCQ GEVGVACSMA AAGLAELMGG
SPEQVCMAAE IAMEHNLGLT CDPVAGQVQV PCIERNGIAA VKAINSTRMA LRRSSAPTVS
LDKVIETMLE TGKDMNAKYR ETSQGGLAVK VIC
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