| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003134 |
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| Symbol | |
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| ID | 8556867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1705439 |
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| End bp | 1706725 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406229 |
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| Product | TRAP dicarboxylate transporter DctM subunit |
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| Protein accession | YP_003285759 |
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| Protein GI | 262393905 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.155582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGTA TAGTGATGTT TTTTGTCGCG CTCTTTGCGC TTTTATTGGG ATTCCCCGTT
GCCTTTACTT TTGGCGGTAT TGCACTGATT TTTGGTGTTT GGGCTGAAGG CATCGAGATG
TTTGCTTTCA TGCCATATCG TATTCAATCC ATTATGGAAA ATACGGTGCT AATGGCCGTG
CCATTGTTTG TCTTCATGGG ACTAGTACTT CAGAAGACGA AGCTTGCAGA GCAACTGCTT
GAGTCGATGG GACGTCTGTT TGGCGGCGTC CGTGGTGGTA TTGCTATTTC GACAGTATTG
GTTGGCGCAT TACTTGCCGC GTCAACGGGC GTAGTCGGCG CATCGGTTGT TGCGATGGGG
CTGATCTCAC TCCCTGTGAT GCTTAAATAC AATTACGACA AAGGCTTGGC GTGCGGGACT
ATTTGTGCGT CTGGTACCTT GGGACAAATT ATTCCACCTT CTATCGTGTT GATCTTGTTA
GGGGATGTAC TCGGCGTTCC GGTCGGGGAT TTATTCCAAG CTGCAATCTG GCCCGGTATC
ACACTCGTCG GCGCCTATGT TATCTACATT CTTATTTACG CGAAGTTGAA TCCTCAAGCC
GCACAGGCAA TAGAGCGCGA TGAGTCGATC AGTCGAAAGC AAGAAGTATT CACCGCGCTG
AAAGCCGTTT TACCGCCACT AGCACTGATC ATTGTGGTAT TGGGCTCCAT CTTTGCTGGG
ATTGCAACGC CAACAGAGTC AGCGGCTCTG GGCGGCGCTG GTGCGATAGT TCTGTCGTTA
CTGTATAAGC AGTTTAGTTG GTCGATGATT TATGATGCAT CGAAAGAAAC CGTTAAAGTA
ACCGCAATGG TCTTTGCTAT TTTGCTAGGG GCAACCGCCT TCTCAATGGC ATTTACCTAC
ACCGGCGGTG ATTATCTAGT CGAAGAGTGG ATGTTAGAAT TGCCTGGAGA AAAGTGGGGC
TTCCTCATCA TTACCATGGT GGTGATTCTG ATTTTAGGCT TCTTTATCGA CTTCGTTGAA
ATCTGCTTTA TCATCGTGCC AATTATTGCG CCGGTCGCTG AGTTGATGGG TATCAACATG
ACGTGGTTTG CGATTCTTAT CGCAATGAAC TTACAGACAT CATTCCTAAC ACCGCCATTT
GGTTTTAGTT TGTTCTATCT AAAAGGCGTC GCACCAGCAG GTGTCACTAC GCGAGATATT
TACAAAGGTG TGATGCCGTT TATCGCGATT CAAATTGTCG TGTTGGCTTC TTTGCTGTTC
TTCCCTGGCT TTTATGGCAT GAGTTGA
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| Protein sequence | MIGIVMFFVA LFALLLGFPV AFTFGGIALI FGVWAEGIEM FAFMPYRIQS IMENTVLMAV
PLFVFMGLVL QKTKLAEQLL ESMGRLFGGV RGGIAISTVL VGALLAASTG VVGASVVAMG
LISLPVMLKY NYDKGLACGT ICASGTLGQI IPPSIVLILL GDVLGVPVGD LFQAAIWPGI
TLVGAYVIYI LIYAKLNPQA AQAIERDESI SRKQEVFTAL KAVLPPLALI IVVLGSIFAG
IATPTESAAL GGAGAIVLSL LYKQFSWSMI YDASKETVKV TAMVFAILLG ATAFSMAFTY
TGGDYLVEEW MLELPGEKWG FLIITMVVIL ILGFFIDFVE ICFIIVPIIA PVAELMGINM
TWFAILIAMN LQTSFLTPPF GFSLFYLKGV APAGVTTRDI YKGVMPFIAI QIVVLASLLF
FPGFYGMS
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