Gene VEA_003133 details

Gene Information

• Locus tag: VEA_003133
• ID: 8556866
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 1704887
• End bp: 1705426
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 646406228
• Product: TRAP dicarboxylate transporter DctQ subunit
• Protein accession: YP_003285758
• Protein GI: 262393904
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00512706
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAGTC TTATTTATAT TGAGCGATTA TTTAACCGCT TTAGCGATTT TCTCGGATGG 
TTGTCCAGCA TCCTGTTTAT TTTATTGTTG GTGAATGTGG TTTACGACGT TGTGATGCGA 
TATGTATTCA ACGATGTATC CATTGCATTC CAAGAAATGG AATGGCATCT ATTCTCCGCC 
GTATTTCTGC TTGGTGTGCC TTACGCGATT AAGTCTGGTG GCCATGTTCG CGTCGACATT 
TTTTATGAAC GCTTATCTTA CAAAGCACAA TCCATCATCG ACATCATAGG CACGCTATTT 
TTCTTATTCC CTTTTTGCCT ACTAGTGGCT TGGTTTGGTA TCGATTTCGC CAAAGAAAGT 
TACGCGCTAG GCGAGACGTC TGGTGATCCA GGCGGATTGC CATATCGTTG GATCATCAAA 
GCGATGATTC CGCTGTCATT TTTCTTTATG GCAGTCAGTG GCATTGGACT GCTGCTGCAT 
TCGATCAACA AGATTGTTAA CCCTCATCTT ATCTATGCCG GTAATAACGG TAAGTCGTAA 

 

Protein sequence

MRSLIYIERL FNRFSDFLGW LSSILFILLL VNVVYDVVMR YVFNDVSIAF QEMEWHLFSA 
VFLLGVPYAI KSGGHVRVDI FYERLSYKAQ SIIDIIGTLF FLFPFCLLVA WFGIDFAKES 
YALGETSGDP GGLPYRWIIK AMIPLSFFFM AVSGIGLLLH SINKIVNPHL IYAGNNGKS