Gene VEA_003120 details

Gene Information

• Locus tag: VEA_003120
• ID: 8556853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 1692127
• End bp: 1692537
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 646406215
• Product: cytochrome c-type heme lyase subunit nrfF nitrite reductase complex assembly
• Protein accession: YP_003285745
• Protein GI: 262393891
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes
• TIGRFAM ID: [TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCACT TTAAATATGC TTACTTCATT ATTGTTTTGT TTTCTTTGTG TTCTTCTTGG 
GTCAAAGCAG AGCAAATTAC GCAGCATGTT GATCTGTTTG AATTTCATTC CGTTGAACTG 
CAACAAAGAG CAAATGCATT AGCTAAGGCT TTACGATGCC CACAATGTCA AAACCAAAAC 
CTTGTTGAAT CTAATGCACA AGCCGCTAAA GATTTAAGAT TGAAAGTGTA CTCGATGGTA 
AACGAAGGAA GTACGGATCA AGAGGTAAAA GATTATTTGG TTCAGAGATA TGGGAATATC 
GTTTTGTATC AGCCACCATT TAATTATTCG ACAGCAGCGT TGTGGATCTT TCCTCTATTA 
CTTTTGATCT TTTTTATCCT ATTTTCGATC AAAATGATAA AGCGTCAATA A 

 

Protein sequence

MSHFKYAYFI IVLFSLCSSW VKAEQITQHV DLFEFHSVEL QQRANALAKA LRCPQCQNQN 
LVESNAQAAK DLRLKVYSMV NEGSTDQEVK DYLVQRYGNI VLYQPPFNYS TAALWIFPLL 
LLIFFILFSI KMIKRQ