| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003117 |
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| Symbol | |
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| ID | 8556850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1688744 |
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| End bp | 1689715 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406212 |
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| Product | NrfD protein |
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| Protein accession | YP_003285742 |
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| Protein GI | 262393888 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.894563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCT TCGAAAGTGC ATTCCACTTT GACTCGTTAG TCTGGGATTG GATTATTGCG
ATTTACTTAT TCCTTGCTGG GATGTCAGCA GGTGCGGTGA TGATTTCTAT CTATTTAAAA
CGCAAAGTGA TTGAAGGTGA TCCCGCAAAC AATGGCATTA TAAAAGCAAT GGCTTGGCTA
GCGCCATTTG GCATTATTTC TGGCTTAGTG ATTTTGATTT TCCACTTAAC TAAACCGCTT
GAGTTTTGGA AGATCATGAT TTACTACAAC CCGACTTCCG TGATGTCGAT GGGCGTTGTC
TTGTTCCAAG TGTACATGCT AGTGCTGTTT GTTTGGATCG GCGTTATCTT CCGTCATCAA
ATCATCAGCT TTTGTGAAGG GAAGTTACCG AGCAAACTGT TGGATTTTGC CGATGGCATC
TTGATTAAAG CAGGGAAAGC CAACAACGCG ATTGAGTTGT TCTTGGGCTT TTTAGCGATC
GTGCTTGCGG CATACACCGG CTTCTTATTG TCTGCATTGA AGACTTACCC AATGCTAAAC
AATCCAGTTC TGCCAATCTT ATTCCTATTC TCTAGTTTGT CATCTGGCGC AGCAGCATGT
TTGATGTTCG GCATCTTGGT GTTTAAAGAG TCGACCAGCA GCCCTAGTGT GTCTTGGGTG
CACGGATTTG AACGCCCAGT GGTATTGTTT GAGCTGTTTG TCTTAGTGAC ATTCTTTACT
GGGCTTATCT TTAGTGGCGG GCAAAATGAA GCCGCGGCTT GGAATGCCAT TTCGAGTGGG
TTCTGGGCTC AGTGGTTCTG GGTTGGGGTG GTGCTCATCG GCATGATAAC GCCTTTGACT
CTTAATTGGT TGACGCCTTC TGAAGTTCGT CATAGGGGAA GTTACGTTTT TGCGGTCACA
ACGTTGAGTT TGGTTGGCGT ACTCATGCTG CGTACTTTCA TTCTCTATGC TGGTCAAATG
ACCATCGTGT AA
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| Protein sequence | MNGFESAFHF DSLVWDWIIA IYLFLAGMSA GAVMISIYLK RKVIEGDPAN NGIIKAMAWL
APFGIISGLV ILIFHLTKPL EFWKIMIYYN PTSVMSMGVV LFQVYMLVLF VWIGVIFRHQ
IISFCEGKLP SKLLDFADGI LIKAGKANNA IELFLGFLAI VLAAYTGFLL SALKTYPMLN
NPVLPILFLF SSLSSGAAAC LMFGILVFKE STSSPSVSWV HGFERPVVLF ELFVLVTFFT
GLIFSGGQNE AAAWNAISSG FWAQWFWVGV VLIGMITPLT LNWLTPSEVR HRGSYVFAVT
TLSLVGVLML RTFILYAGQM TIV
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