Gene VEA_003112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003112 
Symbol 
ID8556845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1684275 
End bp1684898 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content45% 
IMG OID646406207 
Productcytochrome c-type heme lyase subunit nrfG nitrite reductase complex assembly 
Protein accessionYP_003285737 
Protein GI262393883 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.298519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTTT GGTTTTTCAT TGCCATCACT TTGATGGGAT TATTCGTCGT CGTATTATCG 
CTCAGCGCTT CAAGAGTAAG AGCGGCACAA TGGTTCGGTT TTTGTGCTTT GGTATTAGTG
TTAACCAGCG CTAGCTTCTT ATTGTTGCGT CAATCTCCTC CACAACCTAT TCAAGCTGAA
GTCTCTCGAA TGATGACTGC TCGCGATATC ATGCAGGAAA TTCAAGACCA ATTGCGTGAA
GATCCAAACA ATGCAGAATT GTGGTTTCAG TTAGGGCAGG GCTACCTGCT AGAGGGAGAA
CTGGATGGCG CGCTGATTTG TTTTGATTAC GCCATCCAAC TGACTGAGCC AGTCGGTGCC
ACGCAACTTG CTGCGAAAGC GACGACCTTA TACTACATTC ACCAGCAATC AATGACGCAA
GAAGTCAGTT TGCTTCTAGA ACAAGCTTTG CAGATAGAAC CGCACAATGA AGCGGCTTTG
TCTTTGATTG CCAATGATCA TTTTTTGTCA TTCCGCTTTC AGGAAGCCAT TGATACTTGG
GTGCTATTGC TCGACTCGAA CGATCCAAGC TTGGATCGAG TACAAATTAT TAACTCGATC
AATAAAGCGA AAGAGCTGTT GTAG
 
Protein sequence
MSVWFFIAIT LMGLFVVVLS LSASRVRAAQ WFGFCALVLV LTSASFLLLR QSPPQPIQAE 
VSRMMTARDI MQEIQDQLRE DPNNAELWFQ LGQGYLLEGE LDGALICFDY AIQLTEPVGA
TQLAAKATTL YYIHQQSMTQ EVSLLLEQAL QIEPHNEAAL SLIANDHFLS FRFQEAIDTW
VLLLDSNDPS LDRVQIINSI NKAKELL