| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003111 |
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| Symbol | |
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| ID | 8556844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1681431 |
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| End bp | 1684151 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406206 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_003285736 |
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| Protein GI | 262393882 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00046231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TAGCTAAAGA GATCACGCCC GTAAACATTG AAGATGAGCT TAGAGGTTCA
TATCTAGACT ATGCGATGTC AGTCATCGTG GGTCGTGCTC TTCCAGATGT GCGTGATGGC
CTAAAACCAG TACACCGCCG CGTTTTATTC GCGATGAACG TACTAGGCAA CGATTGGAAC
AAACCATATA AAAAATCAGC CCGTGTTGTC GGCGACGTAA TCGGTAAATA TCACCCACAC
GGTGATAGTG CTGTGTACGA CACAATCGTA CGTATGGCTC AACCGTTCTC GCTTCGTTAC
ATGCTGGTCG ATGGTCAAGG TAACTTTGGC TCTATCGATG GCGACTCTGC TGCGGCAATG
CGTTACACCG AAGTTCGAAT GGCAAAAATT GCCCATGAAC TATTGGCTGA CCTAGACAAA
GAGACCGTAG ACTACGTACC AAACTACGAC GGTACTGAGC AGATCCCAGC GGTTCTTCCA
ACTAAAATTC CAAACCTATT GGTTAACGGT GCTTCTGGTA TCGCAGTAGG TATGGCAACC
AACATCCCGC CTCATAACCT TGGCGAAGTG ATCGATGGCT GTCTTGCATA CATCAATAAT
GAAGAAATCA CTATTGATGA ACTAATGGAT TACATTCCTG GTCCTGATTT CCCAACGGCG
GCGCTGATCA GTGGTCGTAA AGGCATTGTA GACGCGTACA AAACAGGTCG CGGTAAAATC
TACATGCGTT CGAAAGCGGA CATCGAAGTG GAGAAGAATG GTAAAGAAAC CATCATCGTC
ACTGAGATCC CGTACCAGGT AAACAAAGCT CGCTTGATCG AAAAGATCGC TGAGCTAGTT
AAAGATAAGA AAGTTGAAGG CATCAGTGCA CTACGCGACG AGTCAGATAA AGACGGTATG
CGTATTGTTA TTGAATGTAA GCGCGACGCA GTGGGCGAAG TGGTTCTAAA CAACCTATAC
GCTCAGACTC AGTTGCAAAC CACTTTCGGT ATCAACATGG TGGCCCTAAA CAATGGCCAA
CCACAGCTAT TCAACCTGAA AGATATGTTG AAGTGCTTCG TTGATCACCG TCGTGAAGTT
GTGACTCGTC GTACTATTTT CGAACTACGT AAAGCGCGTG AACGTGCCCA CATCCTTGAA
GGTTTAGCGC TAGCGCTTGC CAACATTGAT GAAATCATTG AGCTTATCCG TAAGGCGCCA
ACACCGGCTG AAGCAAAAGC GGGCCTTATC GCTCGTGGTT GGGATTTAGG CAACGTTTCA
GCAATGCTAG AGCGTGCTGG TACAGATGCT GCGCGCCCTG AATGGCTAGA GCCTGAATAC
GGTATTCGTG ATGGTCAGTA CTTCCTGACT GAGCAACAAG CACAAGCTAT CCTAGATCTA
CGTTTACATA AACTAACAGG TCTAGAACAC GAGAAGATTC TTGGCGAATA CAAAACACTT
CTAGAAGAAA TCGCTGAACT CATGCATATC CTTGCGAGCA CTGAGCGTTT GATGGAAGTG
ATCCGCGAAG AACTTGAAGC GGTTCGTGAT GGTTTTGGTG ATGCTCGTCG TACAGAAATC
ACAGCTGCGA GCCATGATAT CGACATGGAA GAGCTGATCG CACGTGAAGA CGTTGTGGTT
ACTCTATCGC ACGGTGGTTA CGTTAAGTAC CAAGTACTGA GCGACTACGA GTCACAGCGC
CGTGGTGGTA AAGGTAAGAG TGCAACCAAG ATGAAAGATG AAGACCATAT CGAGCGTCTT
CTAGTGGCGA ATACCCACGA TAACATCTTG TGTTTCTCTA CTCGCGGTAA AACATACCGT
CTGAAAGTTT ACCAATTGCC TCTAGCGAGC CGCACTGCTC GTGGTAAGCC AATTGTGAAC
ATCCTTCCAC TAGAAGAAGG TGAGCGCATT ACCGCGATTC TGCGTGTTGA TGAATTCTCT
GAAGACAAAT TCATCTTCAT GGCAACAGGT GACGGTACGG TTAAGAAAAC GCCGTTGAAC
CAATTTGCAA ATGTTCGTTC AAATGGCCTG ATTGCGGTAA ACCTACGTGA AGACGATTCG
TTAATCGGTG TGGATATCAC TAACGGCGAA AACGAAATCA TGCTGTTCTC TAAAGCGGGT
AAAGTGGTTC GCTTTAAAGA AGCAGAAGAA ATTCCAGTAC TTGACGAAAA TGGTAAGCCA
GTTCTTGATG AGAATGGTCA GCCAGAGATC AAGTTTAAAG GTGTTCGTCC TATGGGTCGT
ACTGCCTCTG GTGTTCGTGG TATGAAACTG GCTGAAAATG ACCAAGTTGT ATCACTTATC
GTTCCTTCGC ACGAAGGCGA CATCCTAACG GTTACAGAAA ACGGTTATGG TAAACGTACA
GCGCTGAGCG AGTACCCGAC AAAAGGTCGA GGCACTCAAG GTGTCGTTTC TATCAAAGTT
TCTGAGCGAA ACGGCCCGGT AGTTGGTGCT ATCCAGGTTG TTGAAGGTGA TGAAATGATG
ATGATCACCG ACGCTGGTAC ACTAGTACGT ACTCGTGTGG GTGAAGTTAG CCAGGTTGGT
CGTAACACGC AAGGTGTAAC GCTTATCCGT ACTGCGGAAG ACGAATCTGT TGTTGGTTTG
CAACGTATTG AAGAAGTTGA TGACGAAGAG CTGCCTGCTG GTGAAGAAGC AGAAGCGTTA
GAGTCAACAG ACGAAAATAC GCAGCAAGAT ACTCCAGAAG CGCCAGCCGC TGATGATGCA
GAGGAAGGTA ACGAAGAGTA A
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| Protein sequence | MSDLAKEITP VNIEDELRGS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMNVLGNDWN
KPYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY MLVDGQGNFG SIDGDSAAAM
RYTEVRMAKI AHELLADLDK ETVDYVPNYD GTEQIPAVLP TKIPNLLVNG ASGIAVGMAT
NIPPHNLGEV IDGCLAYINN EEITIDELMD YIPGPDFPTA ALISGRKGIV DAYKTGRGKI
YMRSKADIEV EKNGKETIIV TEIPYQVNKA RLIEKIAELV KDKKVEGISA LRDESDKDGM
RIVIECKRDA VGEVVLNNLY AQTQLQTTFG INMVALNNGQ PQLFNLKDML KCFVDHRREV
VTRRTIFELR KARERAHILE GLALALANID EIIELIRKAP TPAEAKAGLI ARGWDLGNVS
AMLERAGTDA ARPEWLEPEY GIRDGQYFLT EQQAQAILDL RLHKLTGLEH EKILGEYKTL
LEEIAELMHI LASTERLMEV IREELEAVRD GFGDARRTEI TAASHDIDME ELIAREDVVV
TLSHGGYVKY QVLSDYESQR RGGKGKSATK MKDEDHIERL LVANTHDNIL CFSTRGKTYR
LKVYQLPLAS RTARGKPIVN ILPLEEGERI TAILRVDEFS EDKFIFMATG DGTVKKTPLN
QFANVRSNGL IAVNLREDDS LIGVDITNGE NEIMLFSKAG KVVRFKEAEE IPVLDENGKP
VLDENGQPEI KFKGVRPMGR TASGVRGMKL AENDQVVSLI VPSHEGDILT VTENGYGKRT
ALSEYPTKGR GTQGVVSIKV SERNGPVVGA IQVVEGDEMM MITDAGTLVR TRVGEVSQVG
RNTQGVTLIR TAEDESVVGL QRIEEVDDEE LPAGEEAEAL ESTDENTQQD TPEAPAADDA
EEGNEE
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