| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003103 |
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| Symbol | |
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| ID | 8556836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1671589 |
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| End bp | 1672722 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406198 |
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| Product | carboxynorspermidine decarboxylase putative |
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| Protein accession | YP_003285728 |
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| Protein GI | 262393874 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0984903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACAAA ACGAACTAAA AACGCCATAC TTCATGATTA ATGAAGACAA GCTGATTGAG
AACCTAGAGA AAGCAAAACA GCTAAAAGAC ATCTCTGGTG TGAAGCTTGT ATTAGCACTG
AAGTGCTTCT CAACATGGGG TGTATTCGAC ATCATCAAGC CTTACCTAGA CGGAACAACC
AGCTCTGGCC CGTTTGAAGT GAAGCTTGGC TACGAAACGT TCGGTGGTGA GACACACGCA
TACAGTGTGG GTTACAGCGA AGATGACGTT CGCGACGTGG CGGACATCTG TGACAAGATG
ATCTTTAACT CTCAGTCACA GCTAGCGGCT TATCGTCATA TTGTCGAAGG TAAAGCATCG
ATTGGCTTGC GACTAAACCC AGGTGTGAGC TACGCAGGGC AAGACTTAGC AAACCCAGCT
CGTCAATTCT CTCGTCTTGG TGTTCAGGCT GATCACATCA AACCGGAAAT TTTTGATGGT
ATTGATGGCG TAATGTTCCA CATGAACTGT GAGAACAAAG ACGTGGATGC GTTTATCGGC
TTACTCGATG CTATTTCAGA GCAGTTTGGC GAGTACCTAG ATAAGCTGGA CTGGGTAAGC
ATGGGTGGCG GCGTTTTCTT CACATGGCCG GGGTACGACA TCGAGAAGTT GGGTTTAGCG
CTTAAAGCAT TCTCAGAGAA ACACGGCGTA CAAATGTATC TAGAGCCGGG TGAAGCGATC
ATCACTAAGA CAACCGATCT TGTTGTAACA GTGGTTGATA TTGTGGAGAA CGTGAAGAAG
ACGGCGATTG TCGATTCAGC AACAGAAGCT CACCGTTTGG ATACGCTTAT CTACAACGAG
CCAGCGTCCA TTCTTGAAGC ATCTGAAAAC GGTGAACATG AATACGTGAT TGGATCGTGC
TCTTGTTTAG CTGGTGACCA GTTTTGCGTG GCGAACTTCG AACAGCCTCT CGAGATCGGA
CAGCGTCTGC ACATTCTAGA TAGTGCAGGT TACACCATGG TGAAACTGAA CTGGTTCAAC
GGTCTACGTA TGCCTTCGGT TTACTGTGAA CGCTCGAATG GTGACATTCA AAAACTGAAT
GAGTTTGACT ACTCTGATTT CAAACGTTCA CTATCTCAGT GGTCAGTGAA ATAA
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| Protein sequence | MQQNELKTPY FMINEDKLIE NLEKAKQLKD ISGVKLVLAL KCFSTWGVFD IIKPYLDGTT
SSGPFEVKLG YETFGGETHA YSVGYSEDDV RDVADICDKM IFNSQSQLAA YRHIVEGKAS
IGLRLNPGVS YAGQDLANPA RQFSRLGVQA DHIKPEIFDG IDGVMFHMNC ENKDVDAFIG
LLDAISEQFG EYLDKLDWVS MGGGVFFTWP GYDIEKLGLA LKAFSEKHGV QMYLEPGEAI
ITKTTDLVVT VVDIVENVKK TAIVDSATEA HRLDTLIYNE PASILEASEN GEHEYVIGSC
SCLAGDQFCV ANFEQPLEIG QRLHILDSAG YTMVKLNWFN GLRMPSVYCE RSNGDIQKLN
EFDYSDFKRS LSQWSVK
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