Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003099 |
Symbol | |
ID | 8556828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1663160 |
End bp | 1664926 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406190 |
Product | excinuclease ABC subunit C |
Protein accession | YP_003285724 |
Protein GI | 262393870 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000908036 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACAACG CCGAAGCTGT TGTCATCTAT GTAGGTAAAG CCAAAGACCT AAAAAAGCGC CTTTCAAGCT ACTTTCGAAA AAAAGTAGAC AGTGAGAAAA CTCGCGCGCT TGTCAGTAAT ATCGCCAAAA TAGACGTCAC GGTGACTCAC ACTGAGACAG AAGCGCTGAT CTTAGAACAT AACTACATCA AGCAGTATTT ACCGAAATAC AATGTGTTGC TGCGAGATGA TAAGTCTTAC CCTTATATCT TTATTAGCGG CCATAAACAC CCACGGCTTT CTATCCACCG TGGCGCCAAG AAGCGCAAAG GTGAATATTT TGGCCCCTAC CCAGATTCTG GTGCAGTAAG AGAAACATTG CATTTGCTGC AAAAGATATT TCCTGTGCGC CAGTGTGAAG ACACTGTCTA TTCCAACCGA ACGCGCCCAT GTTTGATGTA CCAAATTGGC CGTTGTGCAG GGCCATGCGT TGATACCATC ATTTCTGATG AAGAATACGC AGAGTTGGTT GGCTTTGTGC GCATGTTTTT GCAAGGCAAA GACCAGCAAG TACTCAAACA ACTGATCGAG AAAATGGAAG TTGCCAGTCA GCAATTGCGC TTTGAAGATG CCGCTAAATT TCGCGATCAA ATCCAAGCGA TTAGACGTGT TCAAGAGCAG CAGTACGTCT CAGAAGACAG CATGGATGAT ATGGATGTAC TAGGGTTTGC TCAGGAGAAT GGTATTGCGT GTATTCATAT CCTGATGATA CGCCAAGGTA AAGTGCTTGG TAGCCGTAGC CATTTTCCGA AAATCCCACA AAATACAAGC CAGCAGGAAG TGTTCGATAG TTTTCTGACT CAATACTATT TGAGCCATAA CGAAGCGCGC ACGATTCCTT CTCGTATTAT TTTGAATCAA GAGTTGGCAG AAGATATTGC GCCAATACAG AAAGCGTTAA GTGAAGTGGC AGGTCGTAAG GTTCATTTCC ATACCTCGCC AACTGGCTCT CGAGCAAGGT ATCTCAAGCT TTCGAACACG AATGCACTAA CGGCGATTAC CACCAAAATC AATCACAAGA TGACGATTAA TCAGCGTTTT CATGCGCTTC GCGAAACATT GAAGTTGGAG TCTATTGCTC GAATGGAGTG TTTTGATATC TCCCATACCA TGGGGGAAAG TACGATTGCA TCGTGTGTGG TGTTCAACAA TGAAGGCCCC GTTAAGCAGG AGTATCGTCG CTATAACATC ACTGGCATTA CCGGTGGTGA CGATTACGCT GCAATGGGAC AAGCGTTGGA GCGCCGTTAT TCGAAGCAAT TGGACGTAGA GAAAATTCCC GACATCATCT TTATCGATGG TGGTAAAGGT CAGTTAAATC GTGCGCATGA CATCATTTCG CAGTACTGGG GGGATTGGCC AAAGCGTCCT ATCATGATTG GTATTGCAAA AGGCGTTACT CGCAAACCAG GTTTAGAAAC GCTGATTACA GTCGATGGGG ACGAGTTTCA TTTACCAAGC GATGCTTCTG CGTTGCACCT TATTCAACAT ATTCGTGATG AAAGCCATAA CCATGCTATA GCGGGGCATC GTGCTAAGCG AGGTAAAACC AGACGTACTA GTGCACTTGA AGGGATTGAG GGAATTGGCC CTAAACGACG TCAGGCGTTA CTCAAGTACA TGGGTGGGTT ACAAGAACTT AAACGTGCAA GTGTCGAAGA AATCGCCAAA GTACCGGGAA TAAGTCACTC TTTAGCAGAA ATTATTTTCC AAGCATTGAA ACAATAA
|
Protein sequence | MYNAEAVVIY VGKAKDLKKR LSSYFRKKVD SEKTRALVSN IAKIDVTVTH TETEALILEH NYIKQYLPKY NVLLRDDKSY PYIFISGHKH PRLSIHRGAK KRKGEYFGPY PDSGAVRETL HLLQKIFPVR QCEDTVYSNR TRPCLMYQIG RCAGPCVDTI ISDEEYAELV GFVRMFLQGK DQQVLKQLIE KMEVASQQLR FEDAAKFRDQ IQAIRRVQEQ QYVSEDSMDD MDVLGFAQEN GIACIHILMI RQGKVLGSRS HFPKIPQNTS QQEVFDSFLT QYYLSHNEAR TIPSRIILNQ ELAEDIAPIQ KALSEVAGRK VHFHTSPTGS RARYLKLSNT NALTAITTKI NHKMTINQRF HALRETLKLE SIARMECFDI SHTMGESTIA SCVVFNNEGP VKQEYRRYNI TGITGGDDYA AMGQALERRY SKQLDVEKIP DIIFIDGGKG QLNRAHDIIS QYWGDWPKRP IMIGIAKGVT RKPGLETLIT VDGDEFHLPS DASALHLIQH IRDESHNHAI AGHRAKRGKT RRTSALEGIE GIGPKRRQAL LKYMGGLQEL KRASVEEIAK VPGISHSLAE IIFQALKQ
|
| |