| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003079 |
|---|
| Symbol | |
|---|
| ID | 8556808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1642138 |
|---|
| End bp | 1643397 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646406170 |
|---|
| Product | proton/glutamate symporter |
|---|
| Protein accession | YP_003285704 |
|---|
| Protein GI | 262393850 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000289708 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTGT TAAAAGAAAA GAGTTTGCTA AACAACATTG GCGTACAAGT CGTAATCGCC
ATGATCGTGG GCACAGCCGT TGGTGCCATG ATGGGTCATG ATGCGACAGT GTTCGCTCCT
TTAGGTGCTA TCTTTATCAA CTTAATCAAA ATGTTGGTTA TTCCTTTGGT CGCTGTAGCC
TTGATTTCTG GCGCAGCTGG TCTTGGGAAC AGCCAGTCAG CAGGCAAAGT TGGCATCGTC
ACTCTAGGTT ATTTCGGTTT AACATCCGCC CTAGCCGTTG CGCTTGCACT ATTTATGGGC
GAAGTATTCC AACCAGGCAT GGGGATCGAC GTCTCTGGCG TTGAAGGCAT GTTCTCAGCA
GAATACGCTT CAAAAGGTGA ACTACCTACT TTCTGGGCAA CCATCACTGG TATGATCCCA
ACCAACGTTT TCCAATCACT AAATGAAGCA AACATCCTAC AGATCCTCGT TTTCTGTATG
TTCTTTGGTA TTGCAATTTC TAAGCAAGCA AAAGAGCGTC GTGAGCCAAT CATTAATGGT
GTTAACTGCA TCGTTGACGC AATGGTTTGG ATGATCAACA AAGTGATGAT CATTGCCCCT
ATCGGCGTGT TCGGTCTAAT GGCAGAAGCA GTCGGTACAT TCGGTTTTGG CGCACTAATG
GTGGTATTCA AACTGTTCGT TGTTTACGTT GCCGCAATCC TAATCTTCGG TTTCGTTGTT
TACCCAGCAA TGGTGCATAT TTTCACCAAG ACATCAGCGA AGAAGTTCCT GTCTTCAATG
AAAAAGCCAC AAGCTGTTGC GCTTTCAACG GCCTCTTCTA TGGCAACACT GCCTGTCACA
ATGGACACCT GTGAAAAAGA ACTGGGCGTA AAAAATTCAA CCGCGTCATT TGTTCTGCCT
CTAGGCGCAA CGATCAACAT GTCAGGTAAT GCGATTTACT ATGGCTTGGT TGCTATCTTC
TTTGCTCAAC TGTTCAATAT CGACCTAGGT ATGGGCGCTT ACATTGCAAT TATCGTAACG
TCTACATTGG GTGCGGTTGG TCAAGCGGGT GTTCCTGGTC CTTCTTTCCT AGTGGTTGCC
GTACTTCTTG CCGCTGGCAT TCCAATTGAA GGTCTACCAC TGCTATTCGC TCTTGACCGT
ATTTTCGATA TGATTCGTAC AGCACTAAAC ATCACTGGTG ATGCAGCATG TGCAGTTATC
GTTGATGCGC TAATAGAAGA GGAAGCGGCA GAAGCTGAGC TTAAAAAGCA AGAAGCTTAG
|
|---|
| Protein sequence | MEVLKEKSLL NNIGVQVVIA MIVGTAVGAM MGHDATVFAP LGAIFINLIK MLVIPLVAVA
LISGAAGLGN SQSAGKVGIV TLGYFGLTSA LAVALALFMG EVFQPGMGID VSGVEGMFSA
EYASKGELPT FWATITGMIP TNVFQSLNEA NILQILVFCM FFGIAISKQA KERREPIING
VNCIVDAMVW MINKVMIIAP IGVFGLMAEA VGTFGFGALM VVFKLFVVYV AAILIFGFVV
YPAMVHIFTK TSAKKFLSSM KKPQAVALST ASSMATLPVT MDTCEKELGV KNSTASFVLP
LGATINMSGN AIYYGLVAIF FAQLFNIDLG MGAYIAIIVT STLGAVGQAG VPGPSFLVVA
VLLAAGIPIE GLPLLFALDR IFDMIRTALN ITGDAACAVI VDALIEEEAA EAELKKQEA
|
|---|
| |