Gene VEA_003070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003070 
Symbol 
ID8556799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp1632109 
End bp1632825 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content46% 
IMG OID646406161 
Producttranscriptional activator MetR 
Protein accessionYP_003285695 
Protein GI262393841 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000616788 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGTCTTG CGGAAGATAT TCTTCCCAAA CTCGCAAGAG CAGAAAATGA TTTGGCAAGC 
TTGAAAGAAG ACGTCAATGG TCGGTTGCAT ATGGCGATTG AATGTCACTC ATGTTTCCAA 
TGGCTCATGC CTGCTCTTAG GGAATATCAA CTTGCCTGGC CTAGCGTAAC ACTGGATTTT 
TCATCAGGTT TTGGCTTTGA ACCACTTCCT GCACTGTTAG CTGGCGAGTT GGATCTCGTT 
ATCACGTCAG ATATTCAACC TCGTTCTGAA GTGCATTATG AACCTTTATT CGACTTTGAA 
ATGCGCTTAA TTACCGCGAC CAACCACCCA CTGGCGGAAA AAGAAGTTAT TGATCCGCAA 
GATCTCGCAG ATCAAACCAT GCTCTCTTAT CCGGTTCAAA AACAAAGGCT AGACGTCGTA 
AAACACTTCT TGCAGCCAGC GGGTGTAGAG CCCGCCAAAT GGAAGCAAGC CGACAATACT 
CTGATGTTAG TGCAAATGGT CTCCGCAGGA TTAGGGGTTG CAGCACTGCC AAATTGGGCG 
ATTTCTGAAT TTTCTCGCCA AGGGCTTATT ACCAGTAAAC CTTTTGGCCA AGGCTTATGG 
CGTCGCTTAT TTGCTGCAAC GCGTCACTCA GAGAAAGATA AACGTTACTT ACAAGCCTTT 
TTCGCAACCG CAAGGCTACA ATGTAAAAGC CACCTTGACG GAATCAAGAT GGCTTAG
 
Protein sequence
MRLAEDILPK LARAENDLAS LKEDVNGRLH MAIECHSCFQ WLMPALREYQ LAWPSVTLDF 
SSGFGFEPLP ALLAGELDLV ITSDIQPRSE VHYEPLFDFE MRLITATNHP LAEKEVIDPQ 
DLADQTMLSY PVQKQRLDVV KHFLQPAGVE PAKWKQADNT LMLVQMVSAG LGVAALPNWA 
ISEFSRQGLI TSKPFGQGLW RRLFAATRHS EKDKRYLQAF FATARLQCKS HLDGIKMA