Gene VEA_003050 details

Gene Information

• Locus tag: VEA_003050
• ID: 8556779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 1603542
• End bp: 1604240
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 646406141
• Product: ABC-type antimicrobial peptide transport system ATPase component
• Protein accession: YP_003285675
• Protein GI: 262393821
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAACA AGCCGCTTGT TGAGCTGACC AACATCTGTA AATACTACTC AAGCGGGGAG 
GCGGAAGTTC GCGCGCTAGA CGGCGTTGAC TTAACCATTA ATCAAGGCGA GTTTCTTTCG 
ATTCTTGGCC CGTCCGGTTC GGGTAAGTCA ACGTTGATGA ACATGCTCGG CTGTTTAGAT 
AAGCCCACCG ATGGTGAGTA CCAACTTGGC GGCCAAAACG TCGCAAGTTT AAGTGCGAAT 
GACCTGGCTG GCATTCGTAA CCAAAAGATC GGATTTGTCT TCCAAAGCTT TAACTTATTG 
GAATACGCGA CGGCGCTCGA TAACGTGGCA CTGCCGTTGG TTTACTCTGG CATCAAAGCC 
AAAGAACGTC GCCAGCGCGC AGCTAAATTG CTAGAGCAAG TCGGGCTAGG GGATCGTTTA 
GATCATAAAC CAAACCAGCT TTCTGGTGGT CAAAAGCAAA GAGTTGCGAT TGCAAGAGCC 
TTGGTCAACG ATCCGCAAAT CATCTTAGCG GATGAACCAA CGGGTGCATT GGATTCAAAA 
TCCGGCGCAG AGATTGAAGC CTTGTTCAAT CAACTTCACG CTGAAGGCAG AACCTTGATC 
ATCGTGACGC ACGATAACGC CCTAGCAGAG CGCACCAAAC GTATCATCAC CATCAAAGAT 
GGCAAGGTGA TTTCGGATAG GGTGCCGGAG GGAAGATAA 

 

Protein sequence

MSNKPLVELT NICKYYSSGE AEVRALDGVD LTINQGEFLS ILGPSGSGKS TLMNMLGCLD 
KPTDGEYQLG GQNVASLSAN DLAGIRNQKI GFVFQSFNLL EYATALDNVA LPLVYSGIKA 
KERRQRAAKL LEQVGLGDRL DHKPNQLSGG QKQRVAIARA LVNDPQIILA DEPTGALDSK 
SGAEIEALFN QLHAEGRTLI IVTHDNALAE RTKRIITIKD GKVISDRVPE GR