Gene VEA_003039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003039 
Symbol 
ID8556769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1594541 
End bp1594999 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content45% 
IMG OID646406132 
Productmembrane protein suppressor for copper-sensitivity ScsD 
Protein accessionYP_003285666 
Protein GI262393812 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCTCA TTGTCACCGT TATTTCTATC GCGATGGATT GGTATCGCAC CAAAGATATT 
CCCAAACAGG AGGCACCACC ATTGAGCTCC GTATTGAGCG ATGGTGAATA CTTCGATGCA
ATCGCGCAAA GTCATGAACA ACCTGTCGTT GTTTATTTTT GGGCGACTTG GTGTCCCGCG
TGTAAATTTG TAAGCCCAAG CGTGAGCTGG CTGAGTGATG ACTATGCCGT AGTTGGCGTT
TCTGGCTCAT CGGGACCGAA TGAGCGCGTG GCGCAGTTTA TGCAGGCAAA AGAATATCGT
TTTGAAAACA TAAACGATCC TTCAAGCGAT ATTATGCGTG AATGGAAAAT TAGCGTGACT
CCAACCATTT ATATTTTAAG AAATGGTGAA GTGACCTCTA TTACGACAGG CATCACAACG
CCGATAGGAA TATTGGCGAG AATTTGGTTG GCTCGATAA
 
Protein sequence
MVLIVTVISI AMDWYRTKDI PKQEAPPLSS VLSDGEYFDA IAQSHEQPVV VYFWATWCPA 
CKFVSPSVSW LSDDYAVVGV SGSSGPNERV AQFMQAKEYR FENINDPSSD IMREWKISVT
PTIYILRNGE VTSITTGITT PIGILARIWL AR